KEGG   Cynara cardunculus var. scolymus (artichoke): 112519070
Entry
112519070         CDS       T05604                                 
Name
(RefSeq) lysine-specific demethylase JMJ25-like
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccav03036]
    112519070
Enzymes [BR:ccav01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     112519070
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112519070
SSDB
Motif
Pfam: JmjC Cupin_2
Other DBs
NCBI-GeneID: 112519070
NCBI-ProteinID: XP_024982799
Position
LG 10:508545..523245
AA seq 1143 aa
MEVLIQKENQVSRYTTTEMNVKQKVSASALRHGRKRKVQELMNSQKGHDQGLSMKRTRTP
IQKETKTSRGRSIIPNDSSSVKRCFSGESEENEADVQIRKDSLIPHTKNSIKTARTCGIK
RFYGKSKCSSSKKTFVNVKNDASDSDADYNEEEDDYDDFTLYSSCRRSKPTKYKGRQAKD
CRASNEKLTSKKSKGDSNKKETSNGKQSARTSYWEENQEEEELMDCKQSKQNDVNSSPHD
ERISRRRRTVSDKNKLVENGFYYGEWEDEEEENEYINGDDEEESEYANEDDKEENEYASE
DEVEEEDNNAGVGDEIEDENVFSASVERHKLNNVERNGSLKDRKVETDIEFIEEKKQMSF
VKSNPSRSSSSNDTKMKRRPRGSGDCNSASSGGSTSTANNMKDKKNGKERLKCHQCKRND
RKIVVPCTECKETLYCVQCIKQWYPQFSEEDIAELCPFCRGNCNCNLCLHSNFKMSNIDL
TDAEKLQHLHYLINSLLPFLTQIREEQLEEITVEALIQGVSESSITIGQTSCHNDERVYC
NHCSTSIIDLHRSCPKCSYELCLSCCREIRKNDLLSQRKVDFGYFDRGFDYIHGGDLVQD
SFHENNPTSRCDPVINWVAEDDGILFCAPKEMGGCGDCVLELKRILQKDWISTLEAKAEG
ILNKLRIDQPSILPNSFTTGGKTYLKAANREESDDNYLYWPASEDVLTGEELIRFRSHWS
KGEPVIVRKVLEQTTGLSWEPMVMWRALCEHLDPNVSSKMSQVKAIDCLADCEVEISTRK
FFKGYIEGRQYVNSWPEMLKLKDWPPSDKFEDLLPRHCDEFVSALPFPVYTDPRAGFLNL
AVKLPPSVLKPDLGPKTYIAYGIAEELGRGDSVTKLHCDMSDAVNVLTHTAEVSRSDNQK
LAIRELKRRHRAQDESERSGIFSRCADELCVKKDECTSSNEGEESDHVVSTTKEAFKRNQ
PSGVSVDKHTACSLRDFSPQEYAEETGSALWDIFRRADVPKLQEYLRKHSKEFRHTYCCP
VDQVYHPIHDQTFYLTLEHKRRLKEEYGIEPWTFEQRLGEAVFIPAGCPHQVRNLKSCTK
VAVDFVSPENIKECIRLTEEFRKLPINHRAREDKLEIKKMILHAMHQAVTDYEELNDCPD
NVG
NT seq 3432 nt   +upstreamnt  +downstreamnt
atggaggtgctaattcaaaaagaaaatcaagtgagtagatacactactacggaaatgaat
gtgaaacaaaaagtatcggccagtgctcttagacatggaagaaagagaaaggtccaagag
ctcatgaattctcaaaaagggcatgatcaggggttgtcaatgaaaaggacaagaactcct
atccagaaagaaactaaaacttctcgtggtcggagcatcatcccaaatgacagtagttcc
gtcaaaagatgtttttctggtgaatctgaagagaatgaagcagatgtacaaatcaggaag
gactcactcataccacacacgaaaaattcgatcaagacagcaagaacttgtggaatcaaa
agattttacgggaaatcaaaatgctcctcaagcaagaaaacttttgtgaatgtcaaaaat
gatgccagtgactctgatgcggattataatgaggaagaagatgactatgacgacttcact
ctttattcatcatgtagaagatcaaaacctacaaaatataaaggaaggcaggctaaagat
tgcagagcttcaaatgaaaaactaacctcaaaaaaaagcaaaggtgattcaaacaagaaa
gaaacttcaaatggtaagcaatccgcaagaactagctactgggaagaaaaccaagaggaa
gaggaactcatggattgcaaacagagcaaacaaaatgatgttaatagtagcccacatgat
gaacggatctcgagaaggcgtcgtactgtttctgataagaacaaacttgttgaaaatggt
ttttactatggggaatgggaagatgaagaagaagaaaacgaatacatcaatggagatgat
gaagaagaaagcgagtacgccaatgaagatgataaagaagaaaatgaatacgccagtgaa
gatgaggtagaagaagaagacaacaatgctggtgttggtgatgagattgaagatgaaaat
gtattttcggcatcagtggaacgtcataagttgaacaatgttgagagaaatggaagtttg
aaagacaggaaagtggaaactgatattgaattcatagaagagaaaaaacaaatgtctttt
gtgaaatctaatcctagtagaagcagtagttcaaatgatacaaaaatgaaaagaagacca
aggggatcaggggattgtaattctgcttcatcaggtggcagtactagtaccgctaacaac
atgaaggataagaaaaatggaaaggagcgtttgaagtgtcatcaatgtaagagaaatgat
agaaagatcgttgttccctgcactgaatgtaaagaaacactatactgtgtccagtgcatc
aagcaatggtatcctcaattctcagaagaagatattgcagaattatgccccttttgccgt
ggaaactgcaattgcaacttgtgcttacactcaaattttaagatgtcaaatatagatctc
actgatgctgagaagttgcagcatcttcactatctaattaactcactcctcccatttctg
acccaaattcgtgaagaacaacttgaggagataactgtggaagcgcttattcaaggtgta
tctgagtcttcaattacaatagggcagactagctgtcacaacgatgaacgtgtctattgt
aaccactgttcaacatcgatcattgatcttcatcgaagttgtccaaaatgttcatacgag
ctatgccttagttgctgtcgtgagatacggaaaaatgatcttcttagtcaaagaaaagta
gactttgggtactttgatagaggttttgattatattcatgggggagacctggtacaagat
tcatttcatgaaaataatccaactagccgctgtgatcccgtgattaactgggtagctgaa
gatgatgggattttgttttgcgccccaaaagaaatgggtggatgcggtgactgtgtattg
gagctcaagcgtatcctacaaaaggactggatttcaaccttggaagcaaaagcagagggt
atattgaataaactaagaattgatcaaccaagcattctaccaaattctttcacaactggt
ggcaagacatatctcaaagcggccaacagagaagaatcagatgataactacctgtactgg
cctgcttctgaagatgtcctaacaggcgaggagctcattcgctttcgtagccactggtct
aaaggtgaaccagtaattgtcaggaaggtcttagagcaaacaactggtttaagctgggag
cccatggttatgtggcgtgcattatgtgagcatctggacccaaatgtcagttcgaagatg
tcacaagtgaaggctatagactgcttggctgattgtgaggttgaaatcagtactaggaaa
ttttttaaaggttatatagagggaagacaatatgtgaattcctggccggagatgctcaag
ctgaaggattggcccccgtctgataagttcgaggaccttctaccacgtcattgtgatgaa
tttgttagtgcactgcctttcccagtgtatactgatccaagggcagggtttctaaatctt
gctgtcaagttaccaccaagtgtccttaaacctgatctgggtccaaagacatatattgca
tacggaatagctgaagaactcggaagaggggattccgtgactaaacttcattgtgatatg
tcagatgccgtgaatgtattgacacacaccgctgaagtatcaagaagtgataatcagaag
ttagcaataagagagttaaagagaagacacagagctcaagatgaaagtgagaggagtgga
atattttctagatgtgctgatgaattgtgcgtaaagaaagatgaatgtacttcttcaaac
gagggggaagagtctgatcatgttgtaagcacaaccaaagaagcttttaagaggaatcaa
ccaagtggagtttcagtggataaacatactgcatgcagtttgcgtgatttttctccacaa
gaatatgcagaagaaacaggtagtgctctttgggacatcttccgacgagcagacgtgcca
aagttacaggaatatctaaggaagcactccaaagaatttcgacatacatattgctgtcct
gttgatcaagtttatcacccaattcatgatcaaaccttttacctgacattggagcataaa
aggaggctaaaagaggaatatggtatagaaccctggacatttgaacaaaggctgggagag
gcagtttttattcctgcaggatgtccacaccaagtgcgaaatctcaagtcatgtaccaaa
gttgccgtggactttgtttctccagagaacataaaagaatgtatccgactaacagaagag
ttccgtaagctgcccataaatcacagagccagagaagacaagctagagataaagaaaatg
atcctgcatgctatgcatcaagccgttactgattatgaggagttaaacgactgcccagat
aatgtagggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system