KEGG   Cynara cardunculus var. scolymus (artichoke): 112519091
Entry
112519091         CDS       T05604                                 
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
  KO
K15687  E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112519091
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112519091
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112519091
SSDB
Motif
Pfam: zf-CCCH_4 zf_CCCH_4 Torus zf-CCCH zf-CCCH_2 zf-C3HC4 zf-RING_2 zf-CCCH_3 zf-RING_5 zf-RING_UBOX zf-rbx1 zf-C3HC4_2
Other DBs
NCBI-GeneID: 112519091
NCBI-ProteinID: XP_024982835
Position
LG 10:16397252..16406312
AA seq 359 aa
MSLPGNRTRVLCKFFAHGACLKGEHCEFSHDWKDPANNVCTFYQKGACAYGSRCRYDHVK
VSQRQTSASSSAYPYQFADSESVNASSASATAVPGVIGELSASSRPYISPAKPAWGEGSG
QDDLLNDVIGQSRSTNPADIVMCSFAAAGSCPRGENCPHVHGDLCPTCRKQCLHPFRPDE
REEHKKSCEKKHKHLEALKHSQEIECSVCLERVLSKPTAAERKFGLLSECDHPFCISCIR
NWRSSSPTSGMDVNSALRSCPICRKLSYFVIPSVIWYATKDEKQEIVDSYKARLRSIDCR
HFDFGNGACPFGTSCFYKHAYRDGRLEEVVLRHLGDEDGQTVIAKDIRLSDFLNRMRIR
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtctttgccgggaaatcggaccagggtgctctgcaagttctttgctcatggagcatgc
ctgaaaggggagcattgtgagttctcacatgactggaaggacccggccaataacgtgtgc
accttttatcaaaaaggagcttgtgcatatggtagccgttgcagatatgaccatgttaag
gtctctcaacggcaaacttctgcatcgtcatccgcatatccttaccaatttgctgattcg
gaatctgttaatgcatcttcggcatctgcaactgcagtgccaggtgtgattggggagctt
tctgcttcaagtagaccttatatatctcctgcaaaacctgcatggggtgaaggttctggg
caggatgatttgttaaatgatgttattgggcaatcaaggagtactaatcccgcagacatt
gtgatgtgttcatttgctgctgctggtagttgtcctcgtggagaaaattgccctcatgtc
catggggatttatgccctacatgcagaaaacaatgcttgcaccccttcagaccagatgag
agggaggaacataaaaaaagttgcgagaagaagcataagcatcttgaggcgttaaaacac
agtcaagaaatagaatgcagtgtttgccttgaacgtgtactttcaaagccaacagcagct
gagcggaagtttgggttgctatcagaatgtgatcatccgttttgtatatcatgcatcagg
aattggcgcagtagttccccaacatctggaatggatgtgaattctgctttaaggtcctgc
cccatatgtaggaaactttcgtacttcgttattcctagtgtgatttggtatgcaacaaaa
gatgagaagcaggaaattgtagatagctacaaagcaagactcaggtctattgactgcagg
cactttgactttggaaatggggcgtgcccatttggaacgagttgtttttacaagcatgca
taccgtgatggtcgtctagaagaagtggttttgcgtcatcttggggatgaagatggacag
actgtaattgctaaagatattaggctgtcagacttcctcaaccgaatgcgcataaggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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