KEGG   Cynara cardunculus var. scolymus (artichoke): 112520654Help
Entry
112520654         CDS       T05604                                 

Definition
(RefSeq) probable methionine--tRNA ligase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00450  Selenocompound metabolism
ccav00970  Aminoacyl-tRNA biosynthesis
ccav01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    112520654
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    112520654
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccav01007]
    112520654
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112520654
Enzymes [BR:ccav01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     112520654
Amino acid related enzymes [BR:ccav01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   112520654
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    112520654
 Prokaryotic type
   Other AARSs
    112520654
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: tRNA-synt_1g tRNA_bind tRNA-synt_1 tRNA-synt_1e CEP63
Motif
Other DBs
NCBI-GeneID: 112520654
NCBI-ProteinID: XP_024984858
Position
LG 1
AA seq 813 aa AA seqDB search
MGDIPIGGGEDRKATKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLR
GYNAIYVCGTDEYGTATETKALEENCTPKEICDKYHAIHRDVYNWFNISFDEFGRTSTPQ
QTEVCQAIFKKLMENNWLSENTMQQLYCDTCNKFLADRLVEGSCPTPGCNYDSARGDQCE
KCGKLLNPTELISPRCKVCATSPRIRDTDHLFLELPLLEGKLREYISTMSVAGSWSQNAI
HATNAWLKEGLRQRCITRDLKWGVPVPLEKFKDKVFYVWFDAPIGYVSITKCYTPEWEKW
WKNPENVELYQFMGKDNVPFHTVMFPSTLLGTAENWTLMKTISVTEYLNYEAGKFSKSKG
IGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLS
FIAKDPDSGSAKGSGYNSIIPDAPGAESHLLTKALGEKIGNYVDQYVEAMEKVKLKQGLK
IAMSISGEGNAYLQESQFWKLYKEDLPSCSIVMRTSVGVVYLLACLLEPFMPSFSIEVLK
QLNLPLQLSLSDDKGDIARANSPWQIIPVGHRIGTPVPLFKELKDEEVEFFRNKFAGSQA
DRADRAVKEEAEAKKITEKLKNTKVSDKSGKKSAKSAAESKPKAAAEQELTISRLDIRVG
VIKEVQKHPDADSLYVEKIDVGEEQPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPATMRG
IKSHAMVLCANTSDHTKVELVEPPESAAVGERVTFPGFDGQPDDVLNPKKKVWETLQVDL
HTDKELVACFKDLPFTTSAGVCKVSSISDGSIR
NT seq 2442 nt NT seq  +upstreamnt  +downstreamnt
atgggagacattccgatcggcggcggagaggatcggaaagcaacgaagcttccgattccg
ggaaaacgaaacatcctcattaccagtgccctcccttatgtcaacaatgttcctcacctt
ggaaacatcattggctgtgtgttgagtgcggatgtgttcgctcggtattgtcgactgcgg
ggatacaacgcgatatacgtatgtggcactgatgagtatggaacagctaccgagaccaag
gccctggaagaaaattgcactcctaaagaaatttgcgacaagtatcatgcaattcacagg
gacgtatataattggttcaatattagttttgatgaatttggacgaacttcaactccgcag
caaactgaagtttgccaagcaattttcaaaaagttgatggagaataattggctttctgag
aatacaatgcagcagctttactgtgatacatgcaataagtttttagccgaccggcttgta
gaaggatcctgcccaacaccaggttgtaattatgattctgcacgaggagatcaatgtgaa
aaatgtggcaagctattaaatccaacagaactcatcagtcccagatgcaaggtctgtgca
accagccctcgaatccgtgacacagaccacttgttccttgaactccctttgttggaaggt
aaactgcgtgaatacatcagcaccatgtcagtggctggctcatggagtcagaatgccatt
catgcaacaaatgcatggcttaaagaaggattgaggcaacggtgtattactagagatctg
aagtggggtgtccctgtccctcttgagaaattcaaagacaaggttttctatgtatggttt
gacgcacccattgggtatgtctcaattactaaatgctacacacctgagtgggagaagtgg
tggaaaaatcctgaaaatgtggagctatatcaatttatgggcaaggacaatgttccattt
cacactgtaatgtttccttctacacttcttgggactgcagagaactggaccctgatgaag
actattagtgttacagagtacttaaattatgaggcaggaaaattctccaagagtaagggt
attggagtttttggaaatgacgctaaggatacaaacattcctgtagaagtatggcgatat
tatttgttaaccaataggccagaggtatcagacacattatttacatgggcagatttgcaa
gcaaagctaaacagcgaactgctaaataatttaggcaatttcatcaatcgtgtcttgagc
tttattgctaaagatccagactcaggatctgctaagggttcaggatacaattccataatt
cctgatgctccaggtgcagagtcacatctcttaacaaaagcactaggagagaaaattggt
aactatgttgaccaatatgtagaggccatggagaaagtcaagctaaagcaaggattaaaa
attgcaatgagtatctctggcgagggaaatgcatatctacaagaaagtcaattctggaag
ctttacaaggaagatctcccttcctgttccatagtcatgagaacttcagtgggagtagtt
tatcttcttgcatgcctgttagaaccttttatgccatcattttccatagaggtactaaag
cagcttaatttgcctcttcaactatccctttctgatgataaaggagatattgcaagggcc
aatagtccttggcagatcatacctgttggccacagaattgggacccctgtgccattattt
aaggaattgaaagatgaagaagtggagttcttcaggaataagtttgctggcagtcaagct
gatcgtgcagatcgggctgtgaaggaagaagctgaagcaaagaaaattactgaaaagttg
aagaacacaaaagtttcagataaaagtggaaagaaatccgcgaaatctgctgctgaatcc
aaacctaaggctgctgctgagcaggaactaacgatcagtagacttgatatccgtgttggg
gttattaaggaagttcagaagcatcctgatgctgattctttgtacgtggaaaaaattgat
gttggcgaagagcagcctagaaccgttgttagcgggcttgtcaaatttatacctcttgag
gagatgcagaaccggaaggtctgtgttctctgcaacctaaagcctgcaaccatgcggggc
attaaatcacatgcgatggttctttgtgctaacactagtgatcacaccaaggttgaattg
gttgagccacccgagtctgctgctgttggggagagagttactttccctgggtttgatggt
cagcctgatgatgtactgaaccctaagaagaaggtttgggagacactacaagtggattta
catacagacaaggaacttgtagcttgctttaaagatctaccatttaccacatctgctggg
gtttgcaaggtttcatccatatctgatggatcgatacgatga

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