KEGG   Cynara cardunculus var. scolymus (artichoke): 112520764
Entry
112520764         CDS       T05604                                 
Name
(RefSeq) tubulin alpha-3 chain-like
  KO
K07374  tubulin alpha
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04145  Phagosome
ccav04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112520764
  09142 Cell motility
   04814 Motor proteins
    112520764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112520764
   03036 Chromosome and associated proteins [BR:ccav03036]
    112520764
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ccav04812]
    112520764
   04147 Exosome [BR:ccav04147]
    112520764
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112520764
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112520764
Cytoskeleton proteins [BR:ccav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112520764
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112520764
  Exosomal proteins of other body fluids (saliva and urine)
   112520764
  Exosomal proteins of colorectal cancer cells
   112520764
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Romo1
Other DBs
NCBI-GeneID: 112520764
NCBI-ProteinID: XP_024985071
Position
LG 11:complement(4299529..4301824)
AA seq 447 aa
MREIVSIHVGQAGIQVGNSCWELYCLEHGIKPDGCMSIDNTSSSGSNDSFGTFFSEGSSG
KYVPRAVFVDLEPTVIDEVRTGSYRKLFNPKQLIAGKEDAANNFARGHYTVGKAVVDECV
DRVRKLADNCSNLQGFMVFNAVGGGTGSGLGSLILERLSNEYGKTLKLGFTIFPSPQVST
SVVEPYNSVLSTHSLIEHTDIVVQLDNEAIYDICKKKLDMERPTYRNLNRLISQTISSLT
TSLRFNGSMNVDISEFQTNLVPFPRIHFMLSSYAPIISSAKAYHELLSVPEITNAVFDPS
SMMAKCDPRHGKYMACCLMYRGDVAPKDVNTAVGSIKTKKTIQFVDWCPTGFKCGINNQA
PSAVPGGDLAQVKRAVCMISNNTAVSEVFSRIDHKFDLMFAKRAFVHWYVGEGMEEGEFS
EAREDLAALEKDYEEVAQDGEEEGDEY
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagagaaatcgtaagcatacacgttggacaagctggaattcaggtcgggaattcgtgc
tgggagctatattgccttgaacatggcattaaacccgatggttgtatgtctattgataat
acctcatcaagtgggtcaaacgattccttcggcaccttcttcagcgaaggcagttcggga
aagtacgtcccgagggctgtatttgtcgatcttgagcccacggtcatcgatgaagttaga
accggaagctacaggaagctcttcaatccaaaacaactcattgccggtaaggaggatgca
gctaataacttcgccagaggacattacacggttgggaaagcagtggtcgatgaatgtgtc
gatagagtgagaaaattagcagacaattgcagtaatttgcaagggtttatggttttcaac
gccgtgggtggtggcactggctctgggttaggatcgttgatcttagaacgcttgtccaac
gagtatgggaaaacgctgaaactcggcttcacaatctttccatctccacaggtttcgacg
tcggttgtggagccttacaatagtgtgttatcgactcactcgttgatagaacacaccgac
attgtggtgcaactagacaacgaagcgatatacgatatttgcaagaagaagttggatatg
gaaaggccgacttacaggaacttgaatcgcttaatttctcaaacgatttcgtctttaaca
acttccttgaggtttaatggatccatgaacgtcgacatttcagaattccaaacaaatctg
gtcccattccctcggatccacttcatgctttcatcatacgcaccaatcatctcatctgcg
aaggcctaccacgaactgttatcagttccagagatcacaaatgccgtatttgatccatct
agcatgatggctaagtgcgatccaagacacggtaaatacatggcttgttgtctcatgtat
cgtggagacgttgctccaaaggacgttaatacagccgtcggatccatcaagaccaaaaaa
acgattcaatttgtcgattggtgtccgacggggttcaagtgcgggatcaacaaccaagct
ccatcggcggttcccggtggagatctggcgcaggtgaaacgagcagtgtgcatgataagc
aacaacaccgccgtgtcggaggttttcagtcggatcgatcataagtttgatttgatgttc
gccaaacgagcgttcgttcactggtatgtgggcgaaggcatggaagaaggcgagttttca
gaggctcgtgaagatcttgcagcgctggagaaagattacgaggaagtggcgcaggatggg
gaggaggaaggagatgagtattaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system