KEGG   Cynara cardunculus var. scolymus (artichoke): 112521167
Entry
112521167         CDS       T05604                                 
Name
(RefSeq) GTP-binding nuclear protein Ran1A
  KO
K07936  GTP-binding nuclear protein Ran
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008  Ribosome biogenesis in eukaryotes
ccav03013  Nucleocytoplasmic transport
ccav03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112521167
   03008 Ribosome biogenesis in eukaryotes
    112521167
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112521167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112521167
   03009 Ribosome biogenesis [BR:ccav03009]
    112521167
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112521167
   03036 Chromosome and associated proteins [BR:ccav03036]
    112521167
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112521167
   04031 GTP-binding proteins [BR:ccav04031]
    112521167
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     112521167
Ribosome biogenesis [BR:ccav03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    112521167
  Pre-60S particles
    112521167
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    112521167
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     112521167
   Spindle formation proteins
    112521167
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112521167
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    112521167
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid AAA_16 Septin AAA_7 AAA_22
Other DBs
NCBI-GeneID: 112521167
NCBI-ProteinID: XP_024985644
Position
LG 11:8232387..8234641
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV
ESPALAPPEVQFDLAAQQLHEAELAQAASQPLPDDDDDAFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctttgccaaaccaacaaactgttgattacccaagtttcaaactggttattgttggc
gatggtggaactgggaaaactacatttgtgaagagacatttgaccggagaatttgagaag
aaatatgaaccgacaattggtgtggaggttcatcccttggatttcttcactaactgtggt
aagattcggttttactgctgggacacagctgggcaagagaaatttggtggtcttagagac
ggatattacattcatggtcaatgtgccattatcatgtttgatgtaacagccagattgaca
tacaagaatgtacccacatggcatcgtgatctttgccgggtatgtgagaacattccgatt
gtactatgtggaaacaaggttgatgtgaagaaccgtcaagtgaaagcaaaacaggttaca
tttcacagaaaaaagaacctgcagtattatgagatatcagccaagagtaactacaacttt
gagaagcctttcctgtaccttgccaggaaacttgctggggatcctaacttgcactttgtt
gagtctcctgcacttgctccaccagaagtccaatttgatcttgctgctcaacaactgcat
gaagctgagcttgcacaagctgcaagtcaaccccttccagatgatgatgatgatgctttt
gagtag

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Ontology (7)   
   KEGG BRITE (7)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (31)   

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