KEGG   Cynara cardunculus var. scolymus (artichoke): 112522153
Entry
112522153         CDS       T05604                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2-like
  KO
K12194  charged multivesicular body protein 4A/B
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03250  Viral life cycle - HIV-1
ccav04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112522153
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112522153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112522153
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112522153
Membrane trafficking [BR:ccav04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    112522153
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112522153
  Exosomal proteins of other body fluids (saliva and urine)
   112522153
  Exosomal proteins of colorectal cancer cells
   112522153
SSDB
Motif
Pfam: Snf7 DUF6437
Other DBs
NCBI-GeneID: 112522153
NCBI-ProteinID: XP_024987000
Position
LG 11:13527089..13533609
AA seq 218 aa
MFSRMFGKPKQETNAVTTLDKLNETLEMLEKKEKVLLKKAAAEVEKAKEFTRAKNKRAAI
QCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAQAMKAMQKAVNID
DVDKTMDEINEQTENMKQIQEALSAPIGAAADFDEDELEAELEELEGAELEEQLLQPATT
APAAPVHVPAGRQPTRPAPRKNTAEEDELAALQAEMAL
NT seq 657 nt   +upstreamnt  +downstreamnt
atgttttcgcgtatgtttgggaagcctaagcaagaaacgaacgctgtaacaacgttagac
aaattaaacgagacgcttgagatgttagagaagaaagaaaaggtacttctgaagaaagct
gctgcagaggttgaaaaggcaaaagaatttaccagggcaaaaaataaaagggcggcaata
cagtgtttaaagcgaaaacgactttatgaacagcaaattgaacagcttggcaattttcaa
ttgcgcattcatgatcagatgataatgcttgaaggtgcaaaagctaccacagagacggtg
gatgctttgagaactggagctcaagcaatgaaggcaatgcaaaaggcagtgaatattgat
gatgtcgacaaaacaatggatgagataaatgagcaaacggagaacatgaaacaaattcag
gaagcattgtcagcacctattggtgcagctgctgattttgatgaggatgagttggaggct
gaacttgaagagttagaaggagctgagttggaggaacagcttctacagcctgccacaact
gcccctgcagctccagtgcatgtgcctgctggaagacaaccaacacgtccagctcctagg
aagaacacagctgaggaagatgagcttgctgcattgcaggcagaaatggcactttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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