KEGG   Cynara cardunculus var. scolymus (artichoke): 112522537
Entry
112522537         CDS       T05604                                 
Name
(RefSeq) cell division control protein 48 homolog C isoform X1
  KO
K14571  ribosome biogenesis ATPase
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112522537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccav03009]
    112522537
Ribosome biogenesis [BR:ccav03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    112522537
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 TIP49 AAA_16 AAA_14 AAA_22 AAA_2 RNA_helicase AAA_28 IstB_IS21 AAA_18 AAA_17 AAA_33 nSTAND3 Nucleolin_bd Viral_helicase1 Rad17 AAA_3 Zeta_toxin Mg_chelatase Bac_DnaA Cytidylate_kin2 Parvo_NS1 ATPase_2 TsaE NACHT NB-ARC AAA_19 AAA_11 Vps4_C
Other DBs
NCBI-GeneID: 112522537
NCBI-ProteinID: XP_024987501
Position
LG 12:complement(10352693..10360812)
AA seq 877 aa
MGKAGKSPATSSVFERVLRRRVHETFGNATPSFDEIVDRLRATFPEYGRHKLQPFTRMVK
QALDSSNSKEKKKSRRNDDDDRRSIFNDDDDGTSPSLRSPASKKAKKIDSREQRLQMLEM
KHVARRRIKLQSTSESSDSSSSDVEEDRSAVSTSDNEVYSLQFEPEFDLTKSMLRNKYSG
SKIDGKVDEKRKNVELEVVTNSNNKVNTKVDLMKEDRRVKPVVKAKAQKQKNLSNDDGVD
DNGKDDGPRFKDLGGMDVVLDELKMEVIVPLYHPQLPRSLGVRPMAGILLHGPPGCGKTK
LAHAIANETGVPFYKISATELVSGISGASEENIRELFSKAYRTAPSIVFIDEIDAIASKR
ENLQREMERRIVTQLMTCMDESHRIAKPDDTPKNAKTSDGKPGYVLVIGATNRPDAVDPA
LRRPGRFDREITLGVPDENARVQILSVLTRNLKLEGAFDLVRISRATPGFVGADLAALVN
KAGNLAMKRIIDGRKLELSRESTDTEPNEDWWRKEWTSEEMEKLSITMYDFEVATKLVQP
SSRREGFSSIPNVKWEDVGGLDLLRREFDRYIVRRIKYPDEYEQYGVDLETGFLLYGPPG
CGKTLIAKAVANEAGANFIHIKGPELLTKYVGESELAVRTIFSRARTCSPCILFFDEVDA
LTTMRGXEGGWVVERLLNQVSKIYAHCSSVSFHHRISLCLILVYLRDDSSLYLQLLIELD
GADQRKGVYVIGATNRPEVMDRAVLRPGRFGKLLYVPLPNQEERGLILKALAXKKPLDAD
VDLFAIGRSEACANLSGADLSALMNEAAMAAVEEKFMRCEAATAAAXEGXSVSSPESSLE
HTIKAIHFEQALRKISPSVSDKQKEYYHRLSESFKAT
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggggaaagcaggtaagtcgccggcgacgtcgtcggtgttcgagagagttctacgccgc
cgggtacatgaaaccttcggcaacgccactccatccttcgacgaaatcgtcgaccgcctc
cgtgccacttttcccgaatacggtcgccacaagctccaacctttcaccagaatggtgaaa
caagccctagattccagcaacagcaaagagaagaagaaatcaagaagaaacgatgacgat
gaccgtcgatctatattcaacgatgacgatgacggcacgtcaccgtcgctacgcagtccc
gcgagcaaaaaggcgaagaagattgatagcagagagcagcgattgcagatgttggagatg
aagcatgttgcacggagacgaattaagctacaatcaacctctgagtcttcggattcgtct
tcttctgatgtagaagaagatagaagtgccgtttcgacctccgataatgaggtttatagc
ctgcaatttgaaccagagtttgacttaacgaaatcgatgctcagaaacaagtacagcggg
tcaaaaattgatggaaaagtcgatgaaaaacgtaaaaatgtggagttagaggtggttacc
aatagcaacaataaggtaaatacaaaagttgatttgatgaaggaagatagaagggttaag
ccagtggtaaaagctaaggcacagaaacagaaaaacttgtcaaatgatgatggtgttgat
gacaacgggaaagacgatgggccgaggtttaaggacctgggtggtatggatgtagtcttg
gatgagttgaagatggaggtgattgttcctttatatcatccacagctaccacgaagcctc
ggagttaggccgatggctggtattttgttacacgggccgcctgggtgtgggaagactaaa
ctggctcatgccattgctaatgagactggagttccattttataagatttctgccactgag
ttggtctctggtatatcaggtgcatcagaagagaatatacgagagttgttttctaaagca
tacagaactgcaccgtctatagttttcattgatgagattgatgcaattgcttcaaaaaga
gagaaccttcaaagggagatggaacggcgcattgtgacacaactgatgacttgtatggat
gaatctcacagaattgctaaaccagatgatacgccaaaaaatgcaaagacatctgatggc
aaaccgggatatgtcttggttataggcgctactaatagacctgatgctgttgatccggca
ttaagaaggcccggacgttttgaccgagagattactttaggtgttccagatgaaaatgct
agagtgcagattctttcggtgcttacacgcaatttgaagcttgaaggtgcttttgatctt
gtcagaatttctagggccactccaggatttgtcggagctgatttagcggcattggtgaac
aaagctggtaaccttgctatgaagagaatcatcgatggaaggaagctagagctttctaga
gaaagtacagacacagaaccaaatgaagattggtggaggaaggaatggacttctgaagag
atggaaaagcttagcatcacaatgtatgattttgaggtagcaaccaaattggttcaaccc
tcttctagaagagaaggattctctagcatcccaaatgtcaaatgggaagatgttggaggt
cttgatttattgagaagggagttcgaccgttacatagttaggcgtataaaatatcctgat
gagtatgagcaatatggagtagatttggagacgggttttttgctatatggacctcctggt
tgtggaaaaacattaattgccaaagctgttgctaatgaagcaggggcaaatttcatacac
atcaagggtcctgagcttctgactaaatatgtcggtgagagtgaattggctgtgcggacg
atattcagtcgtgcaaggacatgttctccatgcatactattctttgatgaggtagatgct
ctgacaacaatgcgcggaarggaagggggatgggttgttgagcgactcctgaatcaggtt
agcaaaatttatgctcattgttcatcagtatcattccatcacagaatttcattatgcctg
attttagtgtacttgagagatgacagctctttatatttgcagctattgatagagctagat
ggtgctgatcaacgcaagggtgtttatgtaattggtgccaccaacaggccagaggtgatg
gaccgagcagtcttacggcccggaagatttggaaaactattgtacgtgcctctgccaaat
caagaagagcgagggttgatcttgaaagctcttgctkggaagaagcctctagatgccgat
gtggatttatttgctattgggcgtagtgaggcttgtgcaaatttaagtggagccgatctt
tctgcattgatgaacgaagctgccatggcggctgttgaagagaaattcatgagatgtgaa
gctgcaactgctgctgctcktgaagggaratcggtatcatcaccagaaagctctttagaa
cataccattaaagctatacattttgagcaagcattgagaaaaatctcaccttctgtctca
gataagcaaaaagagtactaccatcggctgtccgagagctttaaagcaacttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (32)   
   Pfam (32)   
All databases (44)   

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