KEGG   Cynara cardunculus var. scolymus (artichoke): 112524506
Entry
112524506         CDS       T05604                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112524506
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccav01009]
    112524506
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112524506
   03036 Chromosome and associated proteins [BR:ccav03036]
    112524506
Protein phosphatases and associated proteins [BR:ccav01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     112524506
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     112524506
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     112524506
SSDB
Motif
Pfam: B56
Other DBs
NCBI-GeneID: 112524506
NCBI-ProteinID: XP_024990118
Position
LG 13:complement(9983747..9989441)
AA seq 490 aa
MLKIIKGMKKGSKPEVIEPPPGPNGPSDVTVNHASRAAIPPTQLPNARSQVIRAPSPQTD
EIEIEVTPMLKDVPISERHVLFIKKVNICSVPFDFSDALKKVKEKEIKRQNLSELVDLVQ
TGSSKMNEIMQEEMVKMISVNIFRPLPPAAFENTGAIDGDPEEDDMYLEPSWPHLQLVYE
LLLRYVVSPDTDTKVAKRFIDHSFVLNLLDLFDSEDPREREYLKTILHRVYGKFMVHRPF
IRKAINNIFYRFIFETERQPGLGELLEILGSIINGFAVPMKEEHKLFLVRALIPLHKAKF
INYYHQQLSYCITQFVEKDYKLADPVIRGLLKYWPVTNCNKEILFLGELEEVLDATQPAE
FQRCMVPLFRQVGRCINSPNFQVAERALFWWNNEHIVDLIAQNRDVILPIIFEPLEKNIQ
GHWNQAINGLTGNVRKMFIEMDAELFEECSNRFLENEAMTKEMHEQRELTWKKLEAIASE
EGGDDIIMVN
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgttgaagatcatcaaggggatgaaaaagggttccaaacccgaagtgattgaaccacct
ccaggacctaatggtccatctgatgtgactgtaaaccatgcttcacgtgccgctatcccc
cctactcagcttcctaatgccaggtcacaggttattcgagccccttcacctcaaactgat
gaaattgagattgaggtgacacctatgttgaaagatgtaccgatatccgaaagacatgtt
ttgtttattaagaaggtgaatatctgttcggttccgtttgacttttctgatgcattgaag
aaagttaaagagaaggagattaagaggcagaacctttcggaacttgttgatttagtgcag
acgggttcgagtaagatgaatgagatcatgcaagaagagatggttaagatgatatcggtg
aatatatttcgacctttgcctcctgcggcatttgagaatacaggagccattgatggtgac
ccggaagaagatgatatgtacttggaaccctcttggccacacttgcaacttgtatatgaa
ttgcttttgagatatgtggtgtcgcctgatacagatactaaagtagctaagcggtttatt
gatcattcgtttgtgttgaacttgcttgatttgtttgattcagaagacccaagggagcgg
gagtatttgaagactatactccatcgcgtatatggtaaatttatggtccatcgccccttc
ataaggaaggcaataaataatatcttttataggtttatatttgaaacagaaaggcagcct
ggccttggtgaattgttggagattcttggaagcataataaatgggtttgctgtcccaatg
aaggaagagcataaactgttccttgtgcgagcacttataccactccacaaggcgaagttt
atcaattattatcatcaacagttatcctactgcataacccagtttgttgaaaaagattac
aaattggctgatcctgttattagagggttattgaaatactggcctgttactaactgtaat
aaagagattctctttcttggagagctagaagaagttctggatgcgacgcaacctgcagag
ttccaacgctgcatggttcctctctttcgacaggttggacgctgcattaatagccccaat
ttccaggttgcagaacgagcacttttctggtggaacaatgaacacatagtggacttgatt
gcacagaatcgagacgtcattttacccatcatctttgaacccttagagaagaatatccag
ggtcactggaatcaagcaataaatggtttgactgggaatgtcagaaaaatgttcatcgag
atggatgcagagctctttgaggagtgtagtaatcggtttctggaaaatgaagccatgacc
aaggaaatgcatgagcaacgtgagctgacttggaagaaactggaggcaattgcatcagag
gaaggaggagatgatataattatggttaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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