KEGG   Cynara cardunculus var. scolymus (artichoke): 112526980Help
Entry
112526980         CDS       T05604                                 

Definition
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like isoform X1
  KO
K01988  lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ccav00603  Glycosphingolipid biosynthesis - globo and isoglobo series
ccav01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    112526980
   00603 Glycosphingolipid biosynthesis - globo and isoglobo series
    112526980
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ccav01003]
    112526980
Enzymes [BR:ccav01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.228  lactosylceramide 4-alpha-galactosyltransferase
     112526980
Glycosyltransferases [BR:ccav01003]
 Glycan extension
  P blood group
   112526980
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Gb3_synth Gly_transf_sug Caps_synth TcdA_TcdB
Motif
Other DBs
NCBI-GeneID: 112526980
NCBI-ProteinID: XP_024993208
Position
LG 14
AA seq 468 aa AA seqDB search
MENKNINDKKRSFFAVLSVFLLLLISFNGASIFSIKIPYQENVTGDSGNLLSMSSSLSNL
MYAVEEEIPSEISRTHLGKTVSGAGDSMSLNSVLHSMHDVQQEQQQKEQRISLVKEETPP
VISNSHLPLLRKSHSLRLESEDFPSKKKRILELLTSMESSGGLRQGDFRARVKEFFSKNE
TSCKVRFFMTWISSLDSFSDKEFHSIETLFNTHPKGCLLIVSNSMDSSKGNQILRPFLDK
GFRVTAISPDLNYLLKNTEAESWFSRIIKGDIDAGYVPFGQNLSNLLRLCLLYKYGGVYI
DTDLIIMKSFSKLKNSIGAQTLDLGSKNWSRLNNAVMVFDKMHPLVYKFIEEFSLTFNGN
KWGHNGPYLVSRVVSRLQGRPGYNFTILPPPAFYPVNWNRVRNLFRGPKNETDAKWLRGK
LRQIRSQSYAVHLWNKQSRKLHIKEGSILRKILSDHCVFCNSSTNAAL
NT seq 1407 nt NT seq  +upstreamnt  +downstreamnt
atggagaacaagaacattaatgacaagaagagatctttctttgctgttctatctgttttc
ttgcttctgttaatttcattcaatggagcttctatcttctccattaagatcccttatcaa
gaaaatgtcactggagattcaggaaacttgctttctatgtcgtcgtctttgtcaaacttg
atgtatgctgtagaagaagaaatcccatctgaaatttcgagaacccatttgggaaaaacg
gtgtccggtgccggagattctatgagcttgaactctgtacttcactcgatgcacgatgta
cagcaagaacaacagcagaaagaacaacgtatttctttggtgaaagaagaaaccccacct
gtaatttcaaatagccatttgccccttttacgtaaatcccacagtctacgtcttgaatct
gaggattttccaagcaaaaagaagagaatcttggagcttttgacttccatggagtcttcc
ggcgggctccggcagggggattttagggcgagagtgaaggagttctttagcaagaacgaa
acttcttgcaaggttcgtttctttatgacctggatttcatcattggattcatttagtgac
aaagaatttcactcgattgaaactttattcaacacacacccgaaagggtgtctgctaatc
gtttcaaactccatggattcaagtaaaggaaaccaaattctgagaccctttttagataaa
ggttttcgagtaacagcaatttcgcctgatttaaactaccttctcaagaacacagaggca
gaatcttggttttccaggataattaaaggcgacattgatgctgggtacgttccatttggt
caaaacttatcgaatttacttcggctttgtttgttgtataaatatggtggtgtttacata
gatactgatcttattatcatgaaaagcttctctaagttaaagaattcaattggagcacaa
acattggatttgggttcaaagaattggagcaggttgaataatgcagtcatggtgttcgat
aaaatgcatccattagtatacaaattcattgaagaattctcattaactttcaatggaaac
aaatggggtcacaacggtccttatttggtttcaagggttgtttcaaggcttcaagggagg
cctggttataattttacgattctacccccaccggcgttttatccagtgaactggaatcgg
gttcggaacctttttcgtgggcctaaaaacgagaccgatgcgaaatggttaaggggaaaa
ctgcggcagattcgaagccagagttacgctgttcatctttggaataaacagagtagaaag
cttcatatcaaagaaggaagcattctgagaaagatcttatcagatcactgtgttttctgc
aattcatccacaaatgctgcactgtaa

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