KEGG   Clostridium cellulovorans: Clocel_0143
Entry
Clocel_0143       CDS       T01294                                 
Name
(GenBank) ABC-type bacteriocin transporter
  KO
K20344  ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
ccb  Clostridium cellulovorans
Pathway
ccb02010  ABC transporters
ccb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ccb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Clocel_0143
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Clocel_0143
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccb01002]
    Clocel_0143
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ccb02000]
    Clocel_0143
Peptidases and inhibitors [BR:ccb01002]
 Cysteine peptidases
  Family C39
   Clocel_0143
Transporters [BR:ccb02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC-BAC subgroup
    Clocel_0143
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran SMC_N AAA_22 AAA_24 nSTAND3 AAA_18 ABC_ATPase TsaE AAA_7 AAA AAA_25 Sigma54_activat AAA_29 G-alpha MTS_N AAA_16 NB-ARC Roc AAA_5 Sigma54_activ_2
Other DBs
NCBI-ProteinID: ADL49932
UniProt: D9SNR1
Position
220739..222970
AA seq 743 aa
MSDLLKKYHCVKQHDIKDCGAACIATIAKQYGLKIPISKIRELAGTDMKGTSAFGVIKAA
EALGFTAKGVKASKPEDIFSEFPKPAIAHVIIDESLLHYVVIHSVTKKEILVADPAEGIV
KYTPEKFFKIWTGVLIFMTPAVAFKTGDETKGLFQRFWGLIKVQKNLLTNIFISSMLITL
LGIAGSFYFKFLIDDILPNNLGNSLLVISVAMIGLIIFRIITEFFRSLLLMHMSQNIDIP
LLLGYYNHVIDLPMNFFGTRQVGEIISRFNDAGKIRDAISQTTLTIMIDTVMAIAGGIIL
YMQSPKLFWSCFIPIALYMVLVFAFKSSLEKVNRKVMEDNAELTSYLVEGIEGIETVKAY
NGERKVNLETEKRFIKLIKSVFKHGYVNNLQATLKNTVKGIFGIVVLWIGARLAMKGEIT
VGALISFNALLAYFIEPIERMIDLQPELQSAMVAADRLGEILDLEKERAQNENKKITPTT
LLGDIVLKDVDFRYGTRQLVLKNINMHIKKGEKVALVGESGSGKTTIAKLLMNFYGIEKG
ELTINDYNIKDISLDVLRDKVSYISQDSFFFSGTIMENMEFANCDATFEEIIEACKMTQI
HDFINDMPTRYETLLEEKGSNLSGGQRQRLAIARALLKKPEILIMDEATSNLDSITEKAI
EKTIEECTKNVTTVIIAHRLSTIMKCDKIYVMEKGEVIEEGTHKELLSKKGYYYRLWSGQ
TSDAEAEVASAVDPLSGGDSHEI
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgagcgatttactaaaaaaatatcattgcgtaaaacaacatgatataaaagattgtggg
gcagcttgtatagctactatagcaaaacaatatgggttaaagataccaatatctaagata
agagaattagcgggtacagatatgaaggggacctctgcttttggagttataaaggcagca
gaagcattagggttcactgctaaaggggtaaaagcatcaaagccagaggatattttttcc
gagtttccaaaaccagcgattgcacatgtaataattgatgaatctttattgcattatgta
gttatacatagtgttacaaaaaaagaaatattagtagcagatccagcggaaggtatagtt
aaatacactccagaaaagttctttaagatttggacaggcgtactgatttttatgacgcca
gctgttgcttttaaaacaggggatgagactaaaggattattccagagattttggggcttg
ataaaggtccagaaaaatcttttaacaaatatttttatatcgtctatgctaataacatta
ttgggtatagccggctctttctattttaaattcttgattgatgatattttgccaaacaac
ttaggtaatagcttactggttatatctgtagctatgattggactcattattttcaggata
ataactgaattctttagaagtttattgcttatgcatatgtcgcagaacatagatataccg
cttcttttgggatactacaaccatgtaatagatttacctatgaacttctttggtacaaga
caggttggagaaataatatcaagatttaacgatgcaggtaagatcagagatgccatatca
caaacaactttaactattatgattgatactgttatggctattgctggcggaataatttta
tatatgcagagtccaaaattattttggtcatgttttattccaattgcattatatatggtt
ttagtatttgcctttaagagttcccttgagaaggtaaatagaaaggttatggaggataat
gctgaattaacttcttacttagttgaaggtatagaaggaatagagactgttaaggcttac
aatggagaaagaaaagttaatttagaaactgagaaaagatttataaagcttataaagtcg
gtttttaagcatggctatgtaaacaatcttcaagcaactttgaaaaacactgtaaaaggt
atttttggcattgtggttttatggataggagctagactggctatgaagggtgagataaca
gtaggtgcgcttataagttttaatgcgttactagcttactttattgagccgattgaaaga
atgattgatttgcagcctgaattacaaagtgctatggttgcagctgatagattaggagaa
atcctagaccttgaaaaagaaagagcacaaaatgaaaataaaaagataacaccaactact
cttttaggtgatattgttttaaaagatgtagactttagatatggtacaaggcaattggtc
ttaaaaaatatcaatatgcacattaaaaaaggtgagaaggtagctttggtaggggaaagt
ggttctggaaagacgactatagcaaaacttcttatgaatttctatggcatagagaaaggt
gagcttacgataaacgattataacatcaaagatataagcttagatgttttaagagataag
gtgtcttatatttcccaggattccttcttcttctctggaactattatggaaaatatggag
tttgcaaattgtgatgctacctttgaagagattatcgaagcatgtaaaatgactcaaatt
catgattttattaatgatatgccaacgagatacgaaaccttgttagaggagaaaggtagc
aacctttcaggtggacaaagacagagattagctattgctagagcacttttgaaaaagcca
gagattcttataatggatgaggctacttcaaatctagattctataacagaaaaggctata
gaaaaaactatagaggaatgtactaaaaatgttacaacagtaataattgcacatagatta
agcactattatgaaatgtgacaagatatacgttatggaaaaaggtgaagttattgaagaa
ggaactcataaggagctgctaagtaaaaaaggttattattatagattgtggagtggacaa
acttctgatgctgaagctgaagttgcatctgcggtagatccattaagcggaggtgatagc
catgagatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system