KEGG   Campylobacter coli CVM N29710: G157_05830
Entry
G157_05830        CDS       T02838                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ccc  Campylobacter coli CVM N29710
Pathway
ccc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ccc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    G157_05830 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccc03021]
    G157_05830 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ccc03400]
    G157_05830 (rpoZ)
Enzymes [BR:ccc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     G157_05830 (rpoZ)
Transcription machinery [BR:ccc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     G157_05830 (rpoZ)
DNA repair and recombination proteins [BR:ccc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      G157_05830 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGV10262
Position
complement(1175554..1175778)
AA seq 74 aa
MENRIEEIAAKALERMGDDRYRLSLVVAKRAEQLADGAAPLVDIDKSKLKFADIALYEIA
ENKITLEGLVETSR
NT seq 225 nt   +upstreamnt  +downstreamnt
atggaaaacagaatcgaagaaatagcagctaaagctctagaaagaatgggagatgatcgc
taccgtctttctttggttgttgcaaaaagagcagaacaattagccgatggtgcagcacct
ttagtggatattgataaaagtaaattaaaatttgcagatattgctttatatgagatagca
gaaaataaaatcactttagagggtctagttgaaaccagtcgatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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