KEGG   Ruminiclostridium cellulolyticum: Ccel_2022
Entry
Ccel_2022         CDS       T00835                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cce  Ruminiclostridium cellulolyticum
Pathway
cce02020  Two-component system
cce02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cce00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Ccel_2022
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Ccel_2022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cce03021]
    Ccel_2022
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cce02035]
    Ccel_2022
Transcription machinery [BR:cce03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Ccel_2022
Bacterial motility proteins [BR:cce02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Ccel_2022
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_37 HTH_10 UPF0122 Clr5
Other DBs
NCBI-ProteinID: ACL76368
UniProt: B8I3M5
Position
complement(2382182..2382946)
AA seq 254 aa
MFSESINHLWKQYIETKDAAAKEKLIIQYAYLIKYVAGRLSIYFGSNVEFDDLVGYGAFG
LIDAIEKYDLAKGVKFETYASLRIRGSIIDSIRDMDWVPRSLRQKNKELEKVYVEIENEK
GHTATDKEVAEKMGLSMSDFYKLLNDVNVSSMMSLDEFMEQNYERGLEIFSESTEDKPEA
SLEFNEMKQLLADCIDKLPEKEKAVITFYYFEELTLKEISAIMNVTESRISQLHTKALLR
MKGKLFRHRIMLES
NT seq 765 nt   +upstreamnt  +downstreamnt
atgtttagcgaaagtataaatcatctgtggaaacagtatattgaaactaaagatgctgct
gcaaaagaaaagttaataattcaatacgcttacctgataaagtatgtagccggaagatta
agtatttattttggttcaaatgtggaatttgatgatttggttggatatggtgcatttgga
cttatagatgcaatagaaaaatatgatctcgctaagggtgttaaatttgaaacatatgcc
tctttaagaataagaggttcaattatagatagcatacgtgatatggattgggttcctaga
tcactcagacaaaaaaataaggaactggaaaaagtatatgttgagatagaaaacgaaaaa
ggccatactgcaactgataaagaagttgctgaaaaaatgggattgagtatgagtgatttt
tataaattattaaatgacgtaaatgtgtcctcaatgatgtcccttgatgagttcatggaa
caaaattatgagagaggtcttgagatatttagtgaaagtaccgaggacaagcccgaggct
tctctggaatttaacgaaatgaaacaacttcttgcagattgtatagataagttacctgaa
aaagaaaaagcagtaattacattctattattttgaagaactgactctaaaagaaataagt
gctataatgaatgtaaccgaatcaagaatttctcagttacatacaaaagcacttctaaga
atgaaaggaaaactgttcagacataggataatgttggagtcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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