KEGG   Clostridium cellulosi: CCDG5_1295
Entry
CCDG5_1295        CDS       T03806                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
ccel  Clostridium cellulosi
Pathway
ccel03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CCDG5_1295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccel03400]
    CCDG5_1295
Enzymes [BR:ccel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CCDG5_1295
DNA repair and recombination proteins [BR:ccel03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CCDG5_1295
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR TrwB_AAD_bind zinc-ribbons_6 PIF1 TF_Zn_Ribbon AAA_16 AAA_22 AAA_30 SWI2_SNF2 AAA_19 DUF1258 PADR1_Zn_ribbon
Other DBs
NCBI-ProteinID: CDZ24409
UniProt: A0A078KTJ8
Position
I:complement(1387510..1389978)
AA seq 822 aa
MPSFKIAEVAVEGTAYHFDKPYCYMVPDDMKNEIKPGARVVVPFGAGNKRRRGIVLAVEN
SDDMSCKPLLTLVDKQPLISEEMLALAAWLKGRTFCTLYEALRLMLPAGLNLHITKTYKL
DHKPSEAEFLMLSPDEQCMLRYVSRARGPVDRESLAKAAGLDATTPLPDLLVQRGLLVCE
DSVFDHSPEASARMVRLAITQEEAEELLESQGEITKKQKSALKTVLDAGAATVKEVMYFS
GVSQSVITALVKKGIFEQFEKRVYRDPYKGIAKTKSEPETLSEEQQNAYNALVSRYRSGK
ACASLLFGVTGSGKTQVFMRLIDDVRADNRTVIVLVPEISLTPQTVARFYARFGKDVAVL
HSGLSLGERLDEWQRIKDGGAGIVVGTRSAIFAPLKNLGLIIIDEEQEYTYKSESSPRYH
ARDVARFRCAYSNAMLLLASATPSIETFYAAQTGRYELTRLDKRYGNAKLPDVIMVDMKN
EIATGNNSTISRRLAQEIEKNLENGEQSILLINRRGYNTFVSCAACGHVLTCPNCSIALT
YHAANHRLMCHYCGYSIEARTKCPECSGSFLKYSGTGTQKAEQAIEELFPTARVLRMDTD
TASGRYSHERMLEQFGKDKYDILIGTQMVAKGLDFPNVTLVGVLSADQSLYLNDFRAAER
TFSLLTQVIGRAGRRASPGRAVIQTQTPENEVLRLAAKQDYEAFYKSETAFRRELLYPPF
CDICEFGFTGISETAVKNAAHDFFMRLKDAIESNKNIPIRIMEPSPAEIARIAGRYRYRI
IAKCRNDKHFRALVASVLESCGKSPLYRKVSVFADMNPLDML
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgccgtcatttaagattgccgaggtagcggttgaaggaacggcgtatcattttgacaag
ccatactgctatatggttcccgacgacatgaaaaacgaaataaaaccgggcgcaagggtg
gtagtgccttttggggcgggcaacaaacggcgccggggaatagttttagccgtagagaat
agtgatgacatgtcctgtaagccgctgctaactcttgttgataaacaaccgctgatttca
gaagaaatgctcgcactggcagcgtggcttaaaggtcgtactttctgtacactttatgag
gctctcaggcttatgctgcctgcgggccttaatttgcatataacaaaaacctataagctt
gaccacaagccttccgaggctgagtttttaatgctttcgccagatgagcagtgtatgctg
cggtatgtgagccgggcgcggggcccagttgaccgcgaaagcctcgcaaaggcggcggga
ctggacgctacaacgccgcttccggatctgcttgtccagcgcgggctgcttgtctgcgag
gacagcgtgtttgatcattcgccggaagcctcggcacgcatggtgcggctggcgattacg
caggaagaggccgaggaactgcttgaatcacagggtgagataacaaaaaagcagaaaagc
gcccttaaaacagtgcttgacgccggtgcggcaacggtaaaagaggtaatgtacttctcc
ggtgtctcgcagtcagttataacggcgcttgtcaaaaagggcatttttgagcagtttgaa
aaacgggtataccgtgacccatacaaaggtatcgcaaaaaccaaatccgaacccgaaacg
ctttcagaggagcagcaaaacgcctataacgcgcttgtttcaagatatagaagcggcaag
gcctgtgcctcactgctgtttggcgtgacaggcagcgggaaaacgcaggtttttatgcgg
ctcattgacgatgtaagggccgacaacaggacggtaatagtgcttgtgccggaaatttca
ctgaccccccagacggtggcaaggttctacgcgcgttttggaaaggatgttgcggtactg
cacagcggcctttccctcggcgagcgtttagatgagtggcagcggattaaagacggcggc
gcgggcattgtggtcggcacgcgttcagcgattttcgcgccccttaaaaacttgggcctt
atcatcatcgacgaagaacaggaatatacatataaatccgagtcctcgccgcgctatcac
gccagggatgtcgcccgtttcaggtgtgcttattcaaatgccatgctgctgcttgcctct
gcgaccccgtccattgagaccttctatgcggcccaaaccggaagatatgagctaacaagg
ctcgataaaaggtacgggaacgctaagcttccggacgtaatcatggtcgatatgaaaaat
gaaatagccacagggaacaatagtacgataagccgccggttagcgcaggaaattgaaaaa
aaccttgaaaacggagagcaatctattctgcttatcaacagaagaggatataatactttt
gtaagctgcgctgcctgcggtcatgtactgacttgtcccaattgcagtatcgcattgacc
taccatgcggcgaaccaccgcttgatgtgccattactgcggctatagcatcgaagcccgc
acaaaatgtccggaatgttccggcagctttttaaagtattcaggcaccggaacgcagaag
gcggaacaggcgattgaggagcttttcccgacggcgagggtcctgcgtatggataccgac
acggcctcgggaagatattcccacgaaagaatgcttgaacaatttggaaaagataagtat
gatatattgatagggactcagatggtggcaaagggactggattttccgaatgtaacgctc
gtcggggtgctttcagcggaccagtcgctgtatttgaacgatttcagggctgccgagcgc
actttctcactgctgacacaggttatcggcagggcgggcagaagggcgagcccggggcgg
gcggtaatacagacgcagactccggaaaatgaagtcctgcgccttgccgcaaaacaggac
tacgaggctttttataaatcagaaacggcctttcgccgcgagcttttgtatccgccgttc
tgtgacatatgtgaattcgggtttaccggcatatcggaaactgcagttaagaacgcggcg
cacgatttctttatgagacttaaagatgctattgagtcaaataagaatataccaatcaga
ataatggagccatcaccggccgagattgcaaggatagcaggaagatatcgttaccgtatt
attgcaaaatgccgtaacgacaaacacttccgtgctcttgtagcgtcggttttggaaagc
tgcggcaaaagcccgttatatcgaaaggtttccgtattcgccgatatgaatccgcttgat
atgttataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (27)   

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