KEGG T03164: YSQ

Campylobacter coli RM1875: YSQ_07140

Entry

YSQ_07140         CDS       T03164

Name

(GenBank) prolyl-tRNA synthetase

K01881

prolyl-tRNA synthetase [EC:6.1.1.15]

Organism

ccf Campylobacter coli RM1875

Pathway

ccf00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:ccf00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    YSQ_07140
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccf01007]
    YSQ_07140
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccf03016]
    YSQ_07140
Enzymes [BR:ccf01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.15  proline---tRNA ligase
     YSQ_07140
Amino acid related enzymes [BR:ccf01007]
Aminoacyl-tRNA synthetase
  Class II (C/G)
   YSQ_07140
Transfer RNA biogenesis [BR:ccf03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    YSQ_07140
Prokaryotic type
    YSQ_07140

SSDB

Motif

Pfam:

tRNA-synt_2b tRNA_edit HGTP_anticodon APCDDC DNA_pol3_delta2

Other DBs

NCBI-ProteinID:

AHK73713

Position

complement(1335246..1336952)

AA seq 568 aa
MKFSKLYAPSLKEAPKDATLPSHIFLTRAGFVEQIGSGLYNFLPLGKRVLDKIRTIVKEE
MDKAGAQEVNLSFVTPATLWQESGRYNVFGKELLRFKDRKENDFVLGPTHEEAMLSLVKN
KITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSFHANEEDLTREFDLMYNT
YSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDILICENCDYAANVEAAVRAN
KTCDEERPEANYASKFHTPDIKTIEALAQFFKINAFYTIKAVVKKAIYENENKLVVFFIR
GCDDLQETKAQNACNALELVDASEEELEKAGLVAGFIGFVGLKNVDFYLDKELEGEKQMI
MGANEKDYHLIGIDVVNLNKDRFKDLAEVKENDCCAKCGGKLKLSKGIEVGHIFKLGQKY
SKTMNANFLDENGKSKPFYMGCYGIGVSRLLAVAIEANHDEKGCIWNKTLAPFTLEIIIS
NIKDEKSLEFATKLYEDLSNAGIEVLLDDRNERFGVKMNDFELIGFPYALVVGKGLEKDE
LEFIDRKTLEKKIISSKEAFDFIKKSIE

NT seq 1707 nt +upstreamnt +downstreamnt
atgaaatttagtaaattatatgcaccaagtcttaaagaggctccaaaagatgcgacttta
ccgagccatatttttttaacacgcgctggctttgttgagcaaattggtagtgggctttat
aattttttacctttgggaaaaagagtattggataaaattcgcactattgttaaggaagaa
atggataaagcaggagcacaagaggtaaatttaagctttgtgactccagcgactttatgg
caagaaagcgggcgttataatgtttttggtaaagagcttttgcgttttaaagatagaaaa
gaaaatgattttgttttaggcccaacgcatgaagaggctatgctttctttggtaaaaaat
aaaatcacatcttataaacaacttcctttgcatttatatcaaatagggcttaaatttcgt
gatgaagcaagaccaagatttgggcttttaagatgtcgtgaatttttaatgaaagatggt
tatagttttcatgcaaatgaagaagatttaacgcgtgaatttgatttgatgtataacact
tattcccaaatcttgcaaagaatggggcttgattttagagcagttgaagctgatagtggg
gctattggtggaagtggttctaaggaatttatggttttggcaaaaaatggtgaggatgat
attttaatttgtgaaaattgtgattatgctgcaaatgttgaagctgcagttagagccaat
aaaacttgtgatgaagagcgtcctgaggcaaattacgcaagtaaatttcacactccagat
attaaaaccatagaagctttagcgcaatttttcaaaatcaatgctttttatactatcaag
gctgtggtgaaaaaagctatttatgaaaatgaaaataaattagttgtgttttttatacgc
ggttgcgatgatttacaagaaaccaaagcgcaaaacgcttgcaatgctcttgagcttgtg
gatgcgagcgaagaagaattggaaaaagcgggattggttgcaggttttataggctttgtg
ggtttgaaaaatgttgatttttatttggataaagagcttgaaggcgaaaaacaaatgata
atgggagcaaatgaaaaagattatcatttaataggcattgatgtagttaatttaaacaaa
gatcgctttaaggatttagcagaggttaaagaaaatgattgctgtgctaaatgtggtgga
aaattaaaattaagcaagggtatagaagtaggacatattttcaaattaggacaaaaatat
tctaagactatgaatgcaaatttcttagatgaaaatggcaaaagcaagcctttttacatg
ggatgttatggtataggagtttcgcgtttacttgcagtagcaattgaggcaaatcatgat
gaaaagggttgtatttggaataaaaccttagctccttttacgcttgaaattataatttca
aatatcaaagatgagaagtctttggaatttgctaccaagctttatgaggatttaagcaat
gcaggtattgaagttttacttgatgatagaaatgagcgttttggtgttaagatgaatgat
tttgagcttataggctttccttatgctttagttgtaggcaagggcttagaaaaggatgaa
ttagaatttatagatagaaaaacactagagaaaaaaatcatatcaagtaaagaagctttt
gattttattaaaaagagtatagaatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

Download RDF

DBGET integrated database retrieval system