KEGG   Clostridium carboxidivorans: Ccar_16330
Entry
Ccar_16330        CDS       T03979                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cck  Clostridium carboxidivorans
Pathway
cck03030  DNA replication
cck03410  Base excision repair
cck03420  Nucleotide excision repair
cck03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Ccar_16330
   03410 Base excision repair
    Ccar_16330
   03420 Nucleotide excision repair
    Ccar_16330
   03440 Homologous recombination
    Ccar_16330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cck03032]
    Ccar_16330
   03400 DNA repair and recombination proteins [BR:cck03400]
    Ccar_16330
Enzymes [BR:cck01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Ccar_16330
DNA replication proteins [BR:cck03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Ccar_16330
DNA repair and recombination proteins [BR:cck03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Ccar_16330
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ccar_16330
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_2 HHH_5 Imm50
Other DBs
NCBI-ProteinID: AKN32344
UniProt: C6PSZ9
Position
complement(3704368..3707010)
AA seq 880 aa
MSKEKLLILDGNSLMNRAFYALPPLTNSQGLHTNGVYGFVTMLLKMREEINPNYIVCTFD
RSAPTFRHNEYKDYKAGRKRMPEELAEQFPVVKKLLNMLSISMFEIDGFEADDLIGTLSV
YAEKKDIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKNRMISEFEVTPTQFIDV
KGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSIENVLNNIDNISGKKIKENLMQYSEQAVF
SKKLATIMVNVPIEIDLNEIKSKENYDVEGVKNLFIELQFKSLIDKVIGEKELKEEIEKE
DIKVDFKNISNIKDLKKLGEDISLIAKDEILYLTFKIVDGNIYSKSYIEKIFLNIDNKNY
VVELEKIYEENNEDTLKCLKDIFENDKIEKVSHNIKVPYTVFKKMGINFTSVKFDTEIAA
YLIDSSRGEYGLNSIIQDYLKIMLQGEEDEIRVKENSLLKDVFETLNKQIKELNMEELLY
EVEQPLTLVLAAMEYEGFKVDNVKLEELGEKFKIEIDKLKKDIYGLAEEEFNINSPKQLG
KILFEKLDLPVIKKTKTGYSTNAEVLEQLLDKHPIIEKITYYRQFTKLYSTYIEGLKAVI
DKDGKIHSSFNQTVTTTGRLSSTEPNLQNIPIKYEMGREIRKVFVPEDENSIILSADYSQ
IELRVLAHIADDENLIDAFLNHSDIHTKTASEVFKVPIDQVTKLQRSNAKAVNFGIVYGI
GDFSLAKDLKISRKEAKNYIDTYFERYPGVKRYMDNVIKQAEDNLYVTTIMNRRRFIPEI
KNSKKMVKAFGERLAMNTPIQGSAADIIKMSMVNVYNILKSKNLKSKVILQVHDELILNV
YKDELEEVKELVKNQMEDVMKLRVPLEVDINLGDNWYEAK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgtctaaagaaaagttattgatacttgatggaaatagtttaatgaatagagcgttttat
gcactgccaccgttaactaactctcaaggattacatactaatggagtatatggttttgta
acaatgcttttaaaaatgagagaagaaattaatcctaattatatagtttgtacttttgat
agaagtgctcctacatttagacacaatgaatacaaggattataaggctggtagaaaaaga
atgccagaagagctggcagaacaatttccagtggtaaaaaaactattaaatatgctttct
ataagtatgtttgaaattgacggattcgaagcagatgatcttataggaactctttctgta
tatgcagaaaaaaaagacatagaagtttacatagttacaggagataaagatgctcttcaa
ttagcaacagataacgtaaaagttgttataacaaaaaaaggaattacagaaaaagagata
tatgataaaaatagaatgatttcagaatttgaagttacaccaactcaatttatagatgta
aaaggccttatgggagacaaatcagataatatacctggtgttccaggagttggtgaaaaa
acagcctttaaacttataaaagaatatggaagtatagaaaatgtattaaataatatagat
aatattagtggaaaaaaaataaaagaaaatttaatgcagtatagtgaacaggcagtattc
agtaaaaagcttgctactatcatggttaatgttcctatagaaatagatctaaatgaaata
aaatctaaggaaaattatgatgtagaaggtgtaaaaaacttatttatagagcttcaattt
aaatcacttatagataaagtaataggtgaaaaagaattaaaagaagaaattgaaaaagaa
gatattaaagttgactttaaaaacataagtaatataaaggatttaaaaaagcttggggaa
gacataagtttaattgcaaaagatgaaattttatacttaacttttaaaattgtagatggg
aatatttactcaaaaagttatatagaaaagatatttttgaatatagataataaaaattat
gtagtagaacttgaaaaaatatatgaagaaaataatgaagatacattaaaatgtcttaag
gatatatttgaaaatgataaaatagaaaaagtaagtcataatataaaagttccatatact
gtatttaagaaaatgggaataaactttaccagtgtaaaatttgatacagaaatagcagct
tatttaattgattcttctaggggtgaatatggattaaattctattatacaggattatctt
aaaataatgctccaaggagaagaagatgaaatcagagtaaaggaaaattctcttttaaaa
gatgtttttgaaaccttaaataaacaaataaaagaattgaatatggaagaacttttatat
gaagtagaacagccgcttacattggtattagcagctatggaatatgaaggctttaaggtt
gataatgtaaaattagaggaactaggagaaaaatttaagatagaaatagataagcttaag
aaggatatatatgggttggcagaagaagaatttaatattaattctcctaaacagcttgga
aaaatattatttgaaaaacttgatttgcctgtaattaaaaagacaaaaacaggatattcc
actaatgcagaggttttagagcagcttttagataaacatcctattatagaaaaaataact
tactatagacagtttactaagctttattctacatacatcgaaggattaaaagctgtaatt
gataaagatggaaaaatacattctagctttaatcaaacagttactactacaggaagattg
tcaagcacggaacctaatcttcaaaatataccaataaaatatgaaatgggtagagaaata
agaaaagtatttgtacctgaagatgaaaattcaataatactttcagcagattattcacaa
atagaactcagagtacttgctcatatagcagatgatgaaaatttaatagacgcttttctt
aatcatagtgatattcatactaaaacagcatcagaagtgttcaaagtgcctatagaccaa
gttactaagcttcaaagaagtaatgctaaggctgtaaactttggtatagtttatggcata
ggtgactttagtttggctaaggatttaaagatatctagaaaagaagctaagaattatata
gatacttatttcgaaagatatccaggtgtaaaaaggtatatggataatgttataaagcag
gcagaggataatctgtatgtaactactataatgaatagaagaaggtttatacctgaaatt
aagaattctaaaaagatggtaaaggcttttggggaaagattagccatgaatacacctatt
caaggcagtgctgcagatataataaagatgtccatggtaaatgtatataacatcttaaag
agtaaaaatttaaagagtaaagtaatacttcaagtgcatgatgaacttattttgaatgta
tataaggatgagttagaagaagtaaaagaattagttaaaaatcaaatggaagatgttatg
aaattaagagtacctttggaagtggatattaatcttggagataattggtacgaggcaaaa
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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