KEGG   Campylobacter coli FB1: VC76_03345
Entry
VC76_03345        CDS       T03870                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
ccof  Campylobacter coli FB1
Pathway
ccof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VC76_03345 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccof03400]
    VC76_03345 (uvrB)
DNA repair and recombination proteins [BR:ccof03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VC76_03345 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      VC76_03345 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 Kinesin UB2H SWI2_SNF2 SLFN-g3_helicase AAA Focal_AT Microtub_bd Cor1 AAA_17 AAA_7
Other DBs
NCBI-ProteinID: AJW58091
Position
complement(652289..654262)
AA seq 657 aa
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIM
SHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFELDMQISQKELLKKLVDMGYKR
NDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMC
KGVENYARHLTGLKEGDTPYTLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFIHKDCQFLFVSATPAPLELELSKENIFHQIMRPTGLLD
PLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMG
RAARNVNGKVLLFCKKITKSMQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNE
ENLGEIYRKGKKFEKMPANERAKIVKELRKQMLEAAKALEFEKAATLRDEINKLKDL
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgttagaacttacaagcgattttaaaccaagtcctgatcaagaacaagcaatacaaggt
attgtcaaaagcataaaaaaaggtaataaatatcaaaccctactcggcgtaacaggaagc
ggaaagacttttaccatggcaaatgtcataaaagaactcaatatgccaacccttatcatg
agtcataacaaaagcctttgcgcccagctttatagcgaatttaaaggttttttttctaag
aaccatgtggaatattttatttcttattatgattattatcagcctgaagcttatataccg
cgcaccgatgtttttatagaaaaagatagctccacaaatgaggatctagaacgcttaaga
cttagcgcaactgcttcgcttttaagctatgaggatgtggtttgtatcgctagtgtctcg
gctaattatggacttggaaatccaaatgaatacataggaatggttttaatctttgaacta
gacatgcaaatttcacaaaaagaacttttaaagaaacttgtagacatgggttataaaaga
aatgataatttctttgatcgtgctgattttcgcgtacaaggtgatattatagatatttat
cctgcttattacgaagatgaagtagtaagacttgaattttttggtgatgaactggatgca
atgtatcattataatgttttagaaaataaaaaaggcaaagatttaaaacgcttcatactt
tatcctacaagccagtttagtgtaggtgaaacaagactaaaacaagcgataaaagacata
aaagcagaacttaacgaacgccttgcttattttgaacatgaaaataaactcgtagaatat
caacgccttaaacaaagggttgaatttgatcttgaaatgcttacaagcacaggaatgtgt
aaaggcgttgaaaattatgcaagacatttaacagggcttaaagaaggtgatactccttat
acgctttttgattattttgcgattaaaaataggaaatttcttgttatagtcgatgaaagc
catgtttctttaccacaatttagaggtatgtttgcaggagatagaagcagaaaacaaacc
ttggtagattatggttttcgtcttccatcagctcttgataatcgtcctttaatgtttgat
gaatttatccataaagattgtcagtttctttttgtttcagccacccctgccccgcttgag
cttgaacttagcaaggaaaatatctttcatcaaattatgcgtccaacaggattacttgat
cctttgatagaacttaaagatagcgataatcaagttgaaattttatttgatgaagccaaa
aaagttatacaaagaaacgaacgcgttttagttactgtgttgactaaaaaactagctgaa
gagcttacaaggtattatttagaacttggtattaaagtaaaatacatgcattcagatatt
gatgcaatagaacgcaatgaaatcataagaggcttaagaagcggtgcttttgatatgtta
ataggtataaatttacttagagaaggacttgatttgcctgaggtttcgcttattgccatt
atggacgcagataaggagggttttttaagaagcactacaagtttaatccaaaccatggga
agagctgctagaaatgtcaatggtaaagttttactcttttgcaaaaagattacaaaatcc
atgcaagaagctatggatactacaaatgagcgtcgcaaacttcaagaagcttacaatcaa
aaacataacatcaccccaacttcagtcaagcgacacatcgaagaaagtttaaaaaatgaa
gaaaacttaggagaaatttatcgcaaaggtaaaaaatttgaaaaaatgcctgctaatgaa
agggctaaaatcgtaaaagagcttcgtaaacaaatgcttgaagctgctaaagcgctcgaa
tttgaaaaagcagcgactttaagagatgagatcaataaattaaaagatttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

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