KEGG   Campylobacter coli RM5611: YSU_02710
Entry
YSU_02710         CDS       T03167                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
ccoi  Campylobacter coli RM5611
Pathway
ccoi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    YSU_02710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccoi03400]
    YSU_02710
DNA repair and recombination proteins [BR:ccoi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     YSU_02710
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR DUF1825
Other DBs
NCBI-ProteinID: AHK74787
Position
538639..540453
AA seq 604 aa
MAEILLKNTLKEELQTLPANAGVYQYFNAEGKLLYVGKAKNLKNRVRSYFAFTPNLRANP
KNSLRIQKMIEEAVHLEFITTNSEADALILENSFIKQLHPKYNILLRDDKTYPYIYVDFN
EEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQKASCKSPCIFYQISRCL
APCDKKITQEEYRLILDKAINALLSPSILVKNLEKQMFHLAQNENYEEAAKIRDQIATIR
DLEIKVEIDIAKLEDFEIFALACESSMLSTLRFVVQNGKIISANSKITPLKNNTDFDKNE
IYKQLILENFSVDIPLVANTVYVYEDFEDRELLEEILSQRFDKKISIKVPKIGEKRRICD
LAFQNACLNIQKEQKNSDFNIQKELKNYFELENLPNCIEVFDNSHLQGVANVGAMITYKM
GTWDKSNYRKFHLKYKNDYEQMREVLTRRALEFDKMPAPDLWLIDGGKALLDLAKEIILS
SGANVDILAISKEKIDAKAHRAKGGAKDKIHSLKGEFALSINDKKLQFLQKLRDEAHRFA
ISFHQNTKKKQDLSSSKLVKSGLSAGVIQKLLAYYGNFESIYKADFKDLTMLVGKKAARK
IREN
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggctgaaattttacttaaaaatactctcaaagaagagcttcaaaccctacctgcaaat
gctggagtgtatcagtattttaatgccgaaggaaagcttttatatgtaggcaaggctaaa
aatcttaaaaaccgcgtaagatcttattttgcttttaccccaaatttacgcgccaatcca
aaaaattctttaagaattcaaaaaatgatagaagaagcggtgcatttggaatttattaca
acaaattcagaagctgatgctttgattttggaaaattcttttatcaagcaacttcatcca
aaatacaatattttactaagagatgataagacttatccttatatttatgtagattttaat
gaagaatttccgcgttttgaaatcactagaaaattagttaaaaaaagtaaaatcaaatat
tttggccccttttttaaaggagctagagagcttttagatgcgctttatttatactatcct
ttaaagcaaaaagcaagttgtaaatctccttgtattttttatcaaatttctcgttgtctt
gcgccttgtgataaaaaaattacccaagaagaatatcgtttgattttagataaagctatc
aatgctcttttaagccctagtattttagtgaaaaatttggaaaaacaaatgtttcattta
gcccaaaatgagaattatgaagaagcggcaaaaataagagatcagattgctacgataagg
gatttggaaattaaagttgagattgatatcgctaaattagaagactttgaaatttttgct
ttagcttgtgaaagctctatgctttcaactttgcgttttgtggtgcaaaatggaaaaatc
atcagcgctaattctaaaatcactccgcttaaaaacaatacagattttgataaaaatgag
atttataaacagcttattttagaaaattttagcgtagacattcctttggttgcaaatact
gtttatgtttatgaggattttgaagacagggagcttttagaagaaattttaagccagaga
tttgataaaaaaatcagcattaaagttcctaaaataggggaaaaaagaagaatttgtgat
ttggcatttcaaaatgcgtgtttaaatatacaaaaagagcaaaaaaatagtgattttaat
atacaaaaagaacttaaaaattatttcgagcttgaaaatctgccaaattgtatagaagtt
tttgataattctcatttgcaaggcgtggcgaatgtaggagctatgataacttataaaatg
ggtacttgggataagtcaaattatagaaaatttcatttaaaatacaaaaatgattatgag
caaatgcgtgaagttttaacgcgtagagcattagaatttgacaaaatgcctgctcctgat
ttgtggcttatagatggaggaaaggctttgcttgatttagctaaagaaatcatcttaagt
agtggggcaaatgttgatattttagcaatctcaaaagaaaaaatcgatgctaaagctcac
cgcgctaaaggaggggctaaagataaaattcactctttaaaaggagaatttgccctaagc
attaacgataaaaaattacaattcttacagaaattaagagatgaagcacatcgttttgcc
ataagttttcatcaaaacactaagaaaaaacaagatttatcaagctctaagcttgtaaaa
tcaggacttagtgcgggagttatacaaaaacttttggcgtattatggaaattttgaatct
atatataaggctgattttaaagatcttacaatgcttgtaggcaagaaagcggcacgaaag
ataagggaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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