KEGG   Campylobacter coli RM5611: YSU_05065
Entry
YSU_05065         CDS       T03167                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ccoi  Campylobacter coli RM5611
Pathway
ccoi00470  D-Amino acid metabolism
ccoi00550  Peptidoglycan biosynthesis
ccoi01100  Metabolic pathways
ccoi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ccoi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    YSU_05065
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    YSU_05065
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    YSU_05065
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ccoi01011]
    YSU_05065
Enzymes [BR:ccoi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     YSU_05065
Peptidoglycan biosynthesis and degradation proteins [BR:ccoi01011]
 Precursor biosynthesis
  Amino acid ligase
   YSU_05065
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp
Other DBs
NCBI-ProteinID: AHK75230
Position
992607..993647
AA seq 346 aa
MKLAILFGGNSYEHEISIVSAVVLKKVINTDLTFIFCDEKRRFYLIPSEKMNSKTFSGGA
YQKEKELFLRQKAFYHKSLWSEKNLDLDCVINLIHGRDGEDGKIASLLEFFDIKFIGPRV
EASVLSFNKEFTKLYAQSVGVKTLDYQMLRKSQKQDFTAHFPCILKPARLGSSIGISIAK
NEKELDYAKDVGFEFDTDILVEDFKSNIKEYNLAGCMIKDEFIFSIIEEPKKKEFLDFEQ
KYLSFSGHNELIEADLSEELKQKLKDNFAKIYNPLFKGALIRCDFFILDNEVYLNEINPN
PGSLANYLFKDFNKIIEQLALSIESEKKIKITYEFLHSINGQKGKL
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaaattagcgatactttttggcggaaattcttacgaacatgaaatcagcattgtaagt
gctgtggtattaaaaaaagtgataaatacggatttgacatttattttttgcgatgaaaaa
aggagattttatttaattcctagcgaaaaaatgaattctaaaacctttagcggtggtgct
taccaaaaagaaaaggagttatttttaagacaaaaggctttttatcataaaagtctatgg
agtgaaaaaaacttagatttagattgtgtgatcaacctcatccacggaagagatggagaa
gacggaaagatagcttctttgcttgaattttttgatatcaaattcataggtcctagggtt
gaagcaagtgttttatctttcaataaagagttcacaaaactttacgcacaaagcgttggg
gttaaaactctagattatcaaatgcttagaaaaagtcaaaagcaagattttacagctcat
tttccttgcattttaaagcctgcacgacttgggagcagtatagggatcagcatagctaaa
aatgaaaaggaattggattatgctaaggatgtgggttttgagtttgatactgatattttg
gtagaggattttaaaagtaacatcaaagagtacaatcttgcaggatgtatgatcaaagat
gaatttatcttttcaatcatcgaagaaccaaagaaaaaagaatttttggattttgagcaa
aaatatcttagtttttcaggccataacgaacttatcgaagctgatttgagcgaagaatta
aagcaaaagcttaaagataattttgccaaaatttataatcctttatttaaaggtgcttta
atccgttgtgatttttttatcctagataatgaagtttatctgaatgaaatcaatccaaat
ccaggctctttagcaaattatcttttcaaagattttaacaaaattatagagcaacttgct
ctaagtatagaaagcgaaaagaagattaaaatcacttatgaatttttacattctattaat
ggacaaaaaggcaaattataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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