KEGG T03167: YSU

Campylobacter coli RM5611: YSU_06940

Entry

YSU_06940         CDS       T03167

Name

(GenBank) seryl-tRNA synthetase

K01875

seryl-tRNA synthetase [EC:6.1.1.11]

Organism

ccoi Campylobacter coli RM5611

Pathway

ccoi00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:ccoi00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    YSU_06940
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccoi01007]
    YSU_06940
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccoi03016]
    YSU_06940
Enzymes [BR:ccoi01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     YSU_06940
Amino acid related enzymes [BR:ccoi01007]
Aminoacyl-tRNA synthetase
  Class II (C/G)
   YSU_06940
Transfer RNA biogenesis [BR:ccoi03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    YSU_06940
Prokaryotic type
    YSU_06940

SSDB

Motif

Pfam:

tRNA-synt_2b Seryl_tRNA_N ATG17_like NPR2 Serine_rich Bacillus_HBL DUF1664

Other DBs

NCBI-ProteinID:

AHK75571

Position

complement(1364587..1365822)

AA seq 411 aa
MLDLKNLQNNFDEVAKKLQNKKVDENILKNLAELFTNLKKEKASLEEFQAFQNKFSKELA
TVEDKESLKAKLSENKIKINEQNAKVNALENELETIAHAIPNIPDECVPVGEDEEENVEI
KKVLTPPQFDFTPKEHHDLGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNYMIDF
NRSRGFEFVNVPFLVNSPTMFGTGQLPKFKDDMYKIEDEDLYLISTSEIPVTNLYSGEIL
TSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSIFNEMVEC
ASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDLEVWIPSQNKYREISSVSNCRDFQARRAK
IRYKNEKGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGRIQIPDVLKKYF

NT seq 1236 nt +upstreamnt +downstreamnt
atgcttgatttgaaaaatttacaaaataatttcgatgaggtggctaaaaagctacaaaat
aaaaaagtagatgaaaatatattaaaaaatcttgccgagctttttacaaatttgaaaaaa
gaaaaagcgagtttggaagaatttcaagcttttcagaataaattcagtaaagaactagcc
actgtagaagataaggaaagtttgaaggcaaaactcagtgaaaataaaattaaaatcaat
gagcaaaatgcaaaagtaaatgctttggaaaatgagttagaaaccattgctcatgctatt
ccaaatatccctgatgaatgcgttcctgtgggtgaagatgaggaagaaaatgttgaaata
aaaaaagttttaacaccccctcaatttgattttactccaaaagaacaccatgatttagga
gagagtttaaactggcttgattttgtgcgaggggtaaaaatttcacaaagccgtttttgt
gtgcttaaaaatgaaggagctttgctaagccgtgctttggtaaattatatgatagatttt
aaccgaagtcgtgggtttgaatttgtaaatgtgccttttttggtaaatagtcctacgatg
tttggcacaggacagcttcccaaatttaaagatgatatgtataagatagaggatgaggat
ttgtatttaatctcaacttctgaaattcctgtgacaaatctttatagtggagaaatttta
acgagtgaaagtttgcctattaaaatgacttgctatagtgcttgttttagaaaagaagca
ggaagtgcagggcgtgacacaagaggcattatccgtcagcatcaatttgaaaaagtagag
cttgtgagcattaccaaacctgaacaaagtgacagtatttttaatgaaatggtagaatgt
gcaagtgatttactcagctctttaggtttagctcatagacatttgatgctttgtaccgga
gatctaggttttagcgcggcaaagactatagatcttgaggtatggataccatcgcaaaat
aaatatcgcgaaatcagttctgtttctaattgtcgtgattttcaagcaaggcgtgcaaaa
attcgctataaaaatgaaaaagggaaaaatgaattagttcatactttaaatggctcttct
ttagcagtaggtagaactttggttgctattatggaaaattatcaagataaagagggtaga
attcaaattcctgatgtattgaaaaaatatttttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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