KEGG   Chondrus crispus (carragheen): CHC_T00002281001
Entry
CHC_T00002281001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K14304  nuclear pore complex protein Nup85
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHC_T00002281001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccp03019]
    CHC_T00002281001
   03036 Chromosome and associated proteins [BR:ccp03036]
    CHC_T00002281001
Messenger RNA biogenesis [BR:ccp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CHC_T00002281001
Chromosome and associated proteins [BR:ccp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CHC_T00002281001
SSDB
Motif
Pfam: Nucleopor_Nup85 Nup84_Nup100
Other DBs
NCBI-GeneID: 17321005
NCBI-ProteinID: XP_005713299
UniProt: R7Q818
AA seq 469 aa
MDDRHTSVFLTEWYRLSCYDITNEKELPYQLMQAGQPREDDEKLWDVLIKLAIVGRLGEM
EQMLHIIKQEQEEIVDMNSLDDTIDNAISTPQPRPMSVMQTVHSIIQSAPPDNISSRSDG
TWEEWQSHCGLWVQSDELKAHPHAKRLVGLLSGNMKGIREACTNWEEMLVSCCLYGQYGM
ASGGNLRGGHTLVWNSSASASEAFPVPENVARGALVEASTGAIRKAIVSLEAGLPTSWFS
AHLCDLLVTAGYLKGDTGAKVERAKRATDLREFYLKEFAREVERSRGCWRIAVDYYKACP
LHGTSMLIDFLSRMPFEGSSDPTVEKVLLICTKMKLQRTGRNICEKLGAHCLNQENLGGA
MSWFARAGLYKRAENVAELALSRAETEGADSQAARSLECVVFALTSAGDEKMMETFYYLR
VYCEMQQALVKISSLFSDGSTEKLPKYISDLVSSAWRLVSRCKMARLKA
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggatgaccgtcacactagcgtatttcttactgagtggtaccgactgagttgctacgat
atcacgaatgagaaggaacttccatatcagttaatgcaagctggacaacctcgcgaggat
gacgaaaagttgtgggatgtactaataaagcttgcaattgttggacgactgggtgaaatg
gaacaaatgttgcatatcatcaagcaagagcaggaagagatcgttgatatgaattcttta
gatgacacaatcgacaacgccatttcaactcctcaaccgcgaccgatgagtgttatgcag
acagtgcatagtattatacaaagcgctccaccagacaatatctcatcgagaagtgatgga
acttgggaagaatggcaaagccactgtggattgtgggttcaatccgacgaattgaaagct
catccccatgcaaagagattggtagggttactgagtggtaatatgaagggtattcgcgag
gcatgcacaaattgggaagagatgctggtttcgtgctgtttatacgggcagtacgggatg
gcgagcggtggaaacctgcgtggtggccatactttggtttggaattcatcggcgtctgca
tcggaagccttccctgttccagaaaatgttgctcgcggagcacttgtcgaggcgtcaaca
ggtgccattcgcaaagcaatcgtgtctctggaggctggccttccaactagttggttttcc
gcccacttgtgcgacctactcgtcacagcggggtatctcaaaggtgacacaggcgccaaa
gtggaaagggcaaaacgggcgacagaccttcgtgagttctatctgaaggagtttgcccga
gaagtggaacgctcccgcggatgctggcgcattgccgtggattattataaggcctgtccg
ttacacggcacatcgatgctgatcgactttttatcgcgaatgccattcgagggttcgagt
gacccaaccgttgaaaaggttctactcatttgcacgaaaatgaaactgcaaagaacgggg
cggaacatctgcgagaagctgggcgcacattgcctgaatcaggaaaatcttggcggtgct
atgtcatggtttgcaagagctggcctttacaaacgcgctgaaaacgtagctgaactggcc
ttgtcaagagctgaaacggagggcgctgattctcaagcggcccgttctcttgaatgcgtt
gtcttcgccctcacaagtgctggcgacgaaaaaatgatggagaccttctattacctacgc
gtttactgtgagatgcaacaagctcttgtgaagatatcttcactgttctcagatggttcg
actgagaagctgccaaagtatatttcggatttggtatcgtcggcgtggcgcctcgtcagc
aggtgcaagatggcgcgcctgaaggcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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