KEGG   Chondrus crispus (carragheen): CHC_T00004183001
Entry
CHC_T00004183001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K03348  anaphase-promoting complex subunit 1
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CHC_T00004183001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccp04121]
    CHC_T00004183001
   03036 Chromosome and associated proteins [BR:ccp03036]
    CHC_T00004183001
Ubiquitin system [BR:ccp04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Other subunits
     CHC_T00004183001
Chromosome and associated proteins [BR:ccp03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    CHC_T00004183001
SSDB
Motif
Pfam: Apc1_MidN APC1_C APC1_3rd
Other DBs
NCBI-GeneID: 17323254
NCBI-ProteinID: XP_005715539
UniProt: R7QE61
AA seq 1318 aa
MDLSSEDLNGTDTSEGTDDDWIYLLNSDFHSIRSRSRCLGPWPHCPFKSSGVKATDVDIM
TSDQETHRLVLHALHLVYEEQKLRPLARDSVIRLARLNVRLAIAIGASDFIDHYRRDHSA
VEHFQKRQPPLSPPQDALVPCIMTNLRDLIRGECEAHTAFLPTLSNTYESQCQQLMASWQ
SQSPASTCVQLVRYFIRLYGKAERGKSFEEKAESLLLAMVEDNFCKTDLEGLPVGVALPL
QDALFICRRKPKATWPYQAFALIGREDLFNFSRFDSERVTRPGQDSDGILTSEKERLSQG
SADEDGCEMETHLFRLRFSEDRRGEEVRRMLRSTDPVTMTPPANPYPDSIMEFDIASEQR
RKLARLVRKRYAAPVGRGAYTLRTYLPSDPTKPLVIPKICVSGVLFSQKGSVVTLNEAEA
SEGQWGEFHNGVAAGLRIVAARTDDDSDNGRILTRAWIVNHRPTASSGSSSHAGMLLALG
LGGYLPALRTTDYYEYLIPRHDLTSIGLMLGLAAGNLGSRHDKITKMLCVHIKYFNGPGF
AVPDFQVSMNVQTAAILGLGMLHQGAGEHLIVEGLFSELGRRPKPGDNVDDRESLALAAG
ISIGLLHLGSGSSAFDAADERLIDRLVLYANGGPGASRVKESNFVNTDVVSPGALLALAL
VYLKTNERRLADRIVLPDSLYNLDRARPDHVFLRVLAKSLIMWDDISATQEWILRIIPEL
IRPVSNGDSIDLLGEIAIGSTYTEVDIDVPGIIDARAFATAGACAAIALKYAGTNHPLAI
NLLYDMCETFERALLQQETQHEPVTWVFMTCLFSMALSLAVIVSGSGNLRVLRLFRRLRK
RQGRPAGSSRYGYHLAIHMAIGFLFMGGGCQTFGTSNIAIAGLLCAIYPRFPEDVKDNQF
HLQAFRHLYVLAVEPRCIETRDVDTGKPCCVDVEIELKEGHKLKTKAPCIVPEAGTVKQV
SVVSERYWPTTTQVIPPIPGYGWFSNTQSQVLFVKRRTGHLPYISDPKGSKGIAARSLSR
SWSGKSDSNSHFDQVDHLVQAFSADAELQAFVTHFCSPLKNSEQYYTAEKLEEDRARRHV
EWMFECLSNDKADAVRLYMNAERASTAVLEGHANPSHVGSLMLLKSYIYSSQLPSTPLLQ
PAYLAKLIHAIHATLNTTTMQERILKYIWSKGRMWPGAEERNGNLRRLDLDFGIALRMEE
VPCPKGLPPLSAALQLATSDRATAGDHWLCFADEHRSTASITAIECIVAALDGRGLDDHQ
LNCIIYEVKPSKYLFLTALDHTIGLCCTLSWYSSRAQAARYIESSHFRNVAATLVSFN
NT seq 3957 nt   +upstreamnt  +downstreamnt
atggacttatccagtgaagacctgaacggcactgacacttctgagggcactgatgacgat
tggatataccttctgaacagcgactttcatagcattcgcagcagatcgcgttgcctaggg
ccttggccgcactgtccatttaagtccagtggcgtaaaggccactgatgttgacatcatg
acgtctgatcaggaaactcatcgccttgttttgcatgccctgcatcttgtgtatgaggaa
cagaaattgcggccgctagcacgagattccgtgattcgtttggcacgtttgaatgttcgc
cttgcgattgcgattggtgcctctgacttcattgaccattatagacgggatcatagtgcg
gttgaacactttcaaaaaagacaaccgcccctcagcccgccacaggatgccctagttccg
tgcattatgacgaatttacgtgatttgataagaggggaatgcgaggctcacactgccttt
ctccccacactgtctaacacttatgaatcccaatgtcagcaactgatggcatcatggcag
tctcaaagtccagcaagtacgtgcgttcaacttgtaaggtattttatccgattgtacggg
aaagctgaaaggggaaagtcttttgaagagaaggcggagtctcttcttcttgccatggtc
gaagataacttttgcaagacagacctagagggcctcccggtcggcgtcgcgctcccccta
caagacgcattattcatttgtcgaagaaaaccaaaggcgacctggccgtaccaagctttt
gctcttattggaagggaggatcttttcaacttcagccgcttcgattcggagagagttact
cgtccaggacaggatagtgatgggattctgacatctgagaaggaacgtttgtctcagggc
tcagcggacgaagatggttgtgagatggaaacccatctatttcgtctacgattcagtgaa
gatcgacggggtgaggaggtgcggagaatgcttcggtcgacggacccagttacaatgact
cctcctgcgaatccatatccagattctataatggaatttgatatcgcatctgagcagcgg
cgaaaactggcacgtcttgtgcgcaagcgttacgctgctccagtagggcgaggtgcatat
accctaaggacttacctgccttcagatccaacaaaaccactggtgatcccaaaaatttgc
gtgagtggagttcttttttcgcagaagggcagtgtggtcactttgaatgaagcagaagcg
agcgaaggtcagtggggtgaattccacaatggtgtcgcggcaggactccgaattgtggca
gctcgcactgacgacgatagcgacaacggtcggattctaacccgcgcatggattgtgaat
cacagaccaactgcatcttctgggagctctagtcatgccggcatgcttctagctctaggg
ctcgggggctatctaccggccctgcgcacgacagattactacgaatatcttataccacga
catgatctaacgtccattggcctaatgctaggtttggctgcaggcaatcttggttcccga
catgataagatcacaaagatgctctgcgtgcacatcaagtacttcaacggtcctggattt
gcagtccctgatttccaggtatccatgaacgttcaaactgctgcaattttgggactaggt
atgttgcatcaaggagccggtgagcatctcatagttgaaggcctattctccgaacttggt
cggcggccaaaaccaggtgacaatgttgatgacagggaaagtcttgcactagctgcgggt
atatcaattggactccttcatctcggcagtggttcatctgcattcgatgctgccgacgag
cgtcttatcgaccgtctagttctctatgcaaatgggggaccaggggcgtcacgggtaaaa
gaaagcaatttcgtcaacacagatgttgtttcacctggagcactgcttgcattggcactg
gtatacttaaagacaaacgaaagacgactagccgacaggatcgtactgccagactcccta
tataatttggacagagcccgacctgatcacgtgtttctgcgagtactggctaagtcgctc
attatgtgggacgatatttcggcaactcaggaatggattctaagaataattccagagctg
atcagaccagtgagtaacggtgactctattgacttgctcggagagattgctattggaagc
acgtatacagaagttgacattgacgtacccggcatcattgatgcacgagctttcgcgaca
gctggggcgtgcgctgccatcgccctcaaatatgctggcaccaatcatcctcttgcaatc
aatctgttgtacgacatgtgcgagacgtttgagagagcactgctgcaacaggaaactcag
catgaaccagtgacatgggtgttcatgacgtgcctgttttcaatggcactctcgcttgca
gtcattgtttcaggtagtggaaatttgagagtactacgtctcttccgcaggttacgaaag
cgtcaaggccgtccagctggaagcagtaggtatggataccatctcgcgatacacatggcc
atcggctttctgttcatgggaggaggatgccagacgttcggcacaagtaacatcgcgatc
gctgggttgttgtgtgccatatacccccgcttcccagaagacgtgaaggacaaccaattt
catttacaagcattccgacatttatatgttttggcggtggaacctcgttgcattgaaact
cgggacgtagacactgggaagccttgttgcgtggacgtcgaaattgaactgaaagaaggt
cacaaattgaaaacgaaagcgccctgcatagtccctgaagccgggactgtgaaacaagtt
tcagttgtaagtgagcgatactggccaacaacaactcaagtcattcccccaattcccggc
tatgggtggttttcgaacacacagagccaggttctcttcgtgaaaagaagaaccggtcat
ctcccatatatttcggatccgaagggatcaaagggaattgctgcaaggtctttgtcccgt
agttggtcaggcaagagcgactcaaattctcattttgatcaagtagatcatttggttcag
gcattcagtgctgatgccgagttgcaagccttcgtgacccatttttgcagtcccttgaag
aattctgagcaatactatacagcagagaaactcgaggaagacagggcccgacgtcacgtg
gaatggatgtttgaatgcttgtcgaacgacaaggctgacgcagtgaggttgtacatgaat
gccgagcgcgcttcaaccgcagttcttgaaggccatgcgaacccttctcacgtcggaagc
ctaatgctcctgaaatcttacatttactcttctcaattgccgagtacgccactattgcaa
cctgcctacctggcgaagctcattcatgcaatccacgccactttgaacacaaccactatg
caagaaaggatattgaagtatatttggagcaaagggaggatgtggccaggtgcggaagaa
agaaatggaaatttgcgaagattggatttagattttggcattgctcttcgaatggaagaa
gtcccatgtcccaaagggttgccacccctttctgcagctctgcagctagcaacctcggac
agagcaaccgcaggagatcattggctgtgctttgcagatgaacataggagcactgctagt
atcacagcaatagaatgtatagttgctgctctggatgggcgaggtctagacgaccaccaa
cttaactgtataatatatgaagtcaaaccctcaaaatatctattcttaacagctctcgac
catacaattggtctgtgctgcactctctcctggtacagctccagagcgcaagctgcaaga
tatatagaatctagtcattttcgaaatgttgctgctactctggtctcgttcaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (58)   

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