KEGG   Chondrus crispus (carragheen): CHC_T00007384001
Entry
CHC_T00007384001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K10849  DNA excision repair protein ERCC-1
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHC_T00007384001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00007384001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     CHC_T00007384001
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH
Other DBs
NCBI-GeneID: 17318750
NCBI-ProteinID: XP_005711033
UniProt: R7QRG6
AA seq 314 aa
MPKHQQAPPPEDSVAQGSPVLTGDGDANKSSQKRPREHSVSAVAQGSPVLTGDGDANKSS
QKQPREHSVSAIPAPSFRDPTHEQVRFSLAHARSKLALLVNRRQLGNPVLRYIRHVRYEV
SDGVTADFLCGPTTCVFFLSLQYHLLNPRYIYSRLRSLGRAFRLRILLVLADVPEHRPPL
HELTKLGLVHDLTVIVAGSRAEAARYLETFRSYDAKGAEIIQERVAGDYASRLHAALGSV
RGISRTDVSTLAFTFGKFRNLGNATQQEIRACPGVGERKVSRLYAALHQPFRSDVPWMGI
EGETDSFEENDVAT
NT seq 945 nt   +upstreamnt  +downstreamnt
atgccgaagcaccagcaggcgcctcctcccgaagacagcgtcgcccagggaagtccagtg
ttgactggtgatggggacgcgaataagtcttcgcagaagcggcctcgtgagcattccgtt
tcggccgtcgcccagggaagtccagtgttgactggtgatggggacgcgaacaagtcttcg
cagaagcagcctcgtgagcattccgtttcggcaattcccgctccgtccttcagagaccct
acacacgagcaagtccgcttttccctcgcacatgcacgatcgaaactagctcttctagtc
aaccgtcgccagctcggaaacccagtcctgcgttatattcgccatgtgcggtatgaagtg
tcagacggcgtcacagccgacttcctatgcggcccgacaacctgcgtttttttcctttca
ttgcaataccatctgctcaatccgcgttacatctactccagactgcgctcgctaggccgt
gctttccgcctccgcattttgctcgttttagcagatgtcccggaacacagacccccactt
catgaacttacgaagctcggtctagttcatgacctcaccgtcattgttgctggttctcgg
gcggaggctgcgcgatatttggagacgtttaggtcttacgatgcaaagggagcagagatt
atacaagagcgcgtcgcgggagattatgcatcccgattgcatgctgctctcgggtctgtg
cggggcatcagtcgcaccgatgtgtccactttggcttttacatttgggaaatttcgcaac
cttggcaatgccacccagcaggagattcgtgcctgtccaggtgtaggggagcgcaaagtg
tctcgcttatacgccgctctacatcaaccgtttcgttcggatgtaccttggatggggata
gagggagaaactgacagttttgaagaaaacgacgtggcgacatag

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