KEGG   Chondrus crispus (carragheen): CHC_T00008489001
Entry
CHC_T00008489001  CDS       T02916                                 
Name
(RefSeq) Alanine--tRNA ligase
  KO
K01872  alanyl-tRNA synthetase [EC:6.1.1.7]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CHC_T00008489001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccp01007]
    CHC_T00008489001
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccp03016]
    CHC_T00008489001
Enzymes [BR:ccp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.7  alanine---tRNA ligase
     CHC_T00008489001
Amino acid related enzymes [BR:ccp01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   CHC_T00008489001
Transfer RNA biogenesis [BR:ccp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CHC_T00008489001
 Prokaryotic type
    CHC_T00008489001
SSDB
Motif
Pfam: tRNA-synt_2c tRNA_SAD DHHA1
Other DBs
NCBI-GeneID: 17318539
NCBI-ProteinID: XP_005710836
UniProt: R7QPY3
AA seq 965 aa
MGITENSIVEDTLAWPASRVRSTFIDFFSQSHAHTFVPSSPVVPHDDPTLLFANAGMNQY
KPIFLGVAPPDSFLSTLKRACNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDY
FKAGAIDMAMELLTGKYGLPAERIYATYFGGDGKQGLEPDLEARQFWLKYLPESRVLPFD
CKDNFWEMGDTGPCGPCTELHFDRIGGRDASALVNMDDPTVIEIWNLVFIQFNREPDGSL
RQLPNKHVDTGMGFERVTSILQEKMSNYDTDVFMPIFEAIRIATSCRPYAGLLGKEDVDG
VDMAYRVIGDHIRTLTIAVTDGAVPDSDGRGYVLRRILRRAVRYGREFLKAPDGFFSGLV
DSVVASMGEAFPELHQKRDHVVEILAHEETTFLRTLGRGTERFKQIRRELEKTGGKVISG
ADAFFLYDTMGFPLDLTQRMAEEVNLSVDEDGYHKAMEAARDMSRNDRASRSGVDGVRLV
LEAEETAYLGSKGIVPTKDDAKYIWNETPSATVKAIFGGGRGNFVESTEKLAEGAVFGVI
LDSTSFYAKAGGQVADTGLLLDATSGNFLFEVTEVEVFGGFILHIGKMVSNGPGFKVGGV
VSCAVDYENRGKIAPNHTLTHVLNFALRKVLGDGVEQKGSEVDHTKLRFDFSQKKALTSK
QVAEVEKIVCKTVEESKPVYTRVTPLADAKAIHSLRAVFGETYPDPVRVVSIGAPVEDLV
ADPLNEAWSALSIEFCGGTHLQNTKEAESFLIIQEEPVATGIRRITAVTKDAAVEKAEVG
KAIEEKVAAAEKLTSAQLPDIVPALVNEVNGTTMGAVQKNALHSRMAVLMKKSTEELKIR
SKGALEEGLLAAEKEVMAAKENGKNLAVVLVPLEGDGKALSKVATKFGGMWPEGAVMAIS
VDHKKNLVRVCSVSTKIPANKWAMDTMAPAGGKGGGKATAANGTCKFQSDEQVEGIVAFA
KQWTP
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgggaatcaccgagaattcaattgtggaggacacactcgcatggcccgccagtagagtt
cgctccacattcattgactttttttcgcagtcgcacgcgcacacgttcgtgccttcgagt
ccagtcgttcctcacgatgaccccactctcttgttcgcgaacgccggtatgaaccagtat
aagccaattttcttaggagtggctcccccggattccttcctgtcgaccctgaagcgtgcg
tgcaactcccaaaagtgcatccgtgcaggaggcaagcacaacgatctcgatgacgtcggg
aaggacacttaccatcacaccttctttgagatgcttggtaactggagttttggagactac
ttcaaagcgggcgcgatcgacatggcaatggaactcctcactggaaaatacggactccct
gccgagcgcatttatgctacgtactttggaggcgatggtaagcaaggcctagaaccagac
ctcgaggcgcgtcagttctggctcaagtacttgccggagagccgcgtgctcccgtttgat
tgcaaggacaacttttgggaaatgggagacactggaccatgtgggccatgcaccgagctt
cattttgacagaattggaggtagggacgcgtccgcactggtcaatatggatgaccccacc
gtgattgagatatggaatctcgtatttatccaattcaacagagagcccgatggctctctc
aggcaactcccaaacaaacatgttgacacaggcatgggctttgagcgcgtcacctctatt
cttcaagaaaagatgtctaactacgacacagatgttttcatgccgattttcgaagcaatt
cggattgcgacaagttgcaggccctacgccggacttttggggaaagaggatgttgacggt
gtcgacatggcttatcgtgtcatcggagatcacattcgcaccctcacgatcgccgttacg
gatggtgccgtgccagatagcgatggccgaggctacgtgcttcgtcgaatcctccgccgt
gcagttcggtacggccgagaatttctaaaggcaccagatggttttttctcgggccttgtt
gactccgttgttgcttcaatgggagaagccttcccggagcttcatcagaagcgcgatcat
gtcgttgagatcttagcacacgaggagaccacctttttgcgcactttgggtcgtggaact
gaacgctttaagcaaatcagaagagaactcgagaagactggcggaaaggttatctcagga
gcggatgccttcttcttgtatgacacaatgggatttccgcttgatctcacgcagcgaatg
gcagaagaggtcaatctttctgttgacgaagacggatatcacaaggcaatggaggctgcc
agagatatgtcgcgcaatgatcgcgccagcaggtctggtgttgatggagttagacttgtt
ttggaagctgaggagacggcatatcttggcagcaaagggattgtgcccaccaaagatgac
gcaaagtacatctggaacgagactccaagcgcaactgtaaaagccatcttcggtggtggc
cgtggcaacttcgtcgagtcaacagagaagctcgctgagggggcggttttcggagttatt
ctggattctacaagcttttacgcgaaggctggtggtcaagttgctgacactggcttgttg
ctcgatgcaacgagcgggaattttctctttgaagtgacagaggttgaggtatttggcggc
ttcatcctccatattgggaaaatggtctctaatggacccggatttaaggtgggaggtgtg
gtgtcttgtgcagtggactatgaaaacagaggaaagatcgcgcccaaccatactcttacg
catgttctgaatttcgctctacgaaaagttttgggagatggcgttgagcagaagggttcc
gaagttgaccacactaagctccgatttgatttctcgcagaaaaaggccttgacgagtaaa
caagtggctgaagtggaaaagattgtgtgtaagaccgtagaggagagcaagccagtttac
acccgggtaactccgctggcagatgcgaaagcaattcattcattgcgtgcagtctttggt
gagacgtacccagatcccgttcgcgtggtctcgattggtgctccagtggaagatttggtg
gctgatccattgaacgaggcctggtctgccctcagtattgagttttgtggaggcactcat
ctgcaaaacacaaaagaggctgaatcttttcttatcattcaggaagaaccagttgctact
ggaataagacgcatcactgcagtgactaaggatgccgcagttgagaaagctgaagtaggc
aaggcaattgaggaaaaggttgcagccgcggagaagcttacctctgcgcaattacctgac
atagtaccggcgcttgttaatgaagtgaacgggacaaccatgggtgcagtgcagaagaat
gcgctacattctagaatggctgtgctgatgaagaaatcaacggaagagttgaaaatacgt
tcgaagggtgctcttgaagaaggtcttcttgcggcagaaaaggaagttatggccgccaaa
gagaacggaaagaacctggcagttgtcttggtgccactcgaaggtgatggcaaagcatta
agcaaagtcgcaacgaagttcggaggaatgtggcccgagggtgcggtaatggctatttca
gtagatcacaagaaaaaccttgtgcgtgtttgttccgttagtacaaaaataccggcaaac
aaatgggcgatggacacgatggctcctgcagggggcaaaggaggagggaaggcaacggca
gcaaacggaacgtgcaagttccaaagtgacgaacaggtcgagggaatagtagcctttgcc
aaacaatggacgccgtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (66)   
   KEGG ORTHOLOGY (1)   
   RefGene (62)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (86)   

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