KEGG   Chondrus crispus (carragheen): CHC_T00008917001
Entry
CHC_T00008917001  CDS       T02916                                 
Name
(RefSeq) Lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CHC_T00008917001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ccp01007]
    CHC_T00008917001
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccp03016]
    CHC_T00008917001
Enzymes [BR:ccp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CHC_T00008917001
Amino acid related enzymes [BR:ccp01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   CHC_T00008917001
Transfer RNA biogenesis [BR:ccp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CHC_T00008917001
 Prokaryotic type
   Other AARSs
    CHC_T00008917001
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d Nucleoporin_N
Other DBs
NCBI-GeneID: 17317560
NCBI-ProteinID: XP_005709851
UniProt: R7QM40
AA seq 555 aa
MSVTAGQPGTPAAAPANTIPRAKIANPDKRNKQKQNQNQKPSTAAELRAARLEKVAAMRA
AGVEPYAYTFNATDTASALQDRYKDLVDGEEAEDGCEIAIAGRIMIRRVFGKLAFFTLQD
KSGTIQLYLDKKYLDSSMGAGSFANIKAWTDGSDIIGVRGVAKRTEKGELSVKVSHWEML
TKSLTPLPDKFHGFTDVEKRYRARHVDLIVNPDVRETFRKRAKITSAIRRFLDNIGFLEM
ETPALHREPGGAEAKPFTTFHNALDQELTLRIATELHLKRLVVGGFDKVYELGRLYRNEG
VSSRHNPEFTSIEIYEAYTDYFRTMQLTEELISSVAQQVLDTTTVEYQGNQIDLSTPWRR
VTMHDIVKEATGTDFSVITDVEEAKDMARNSSVSQDALNKAQSVGEVLNVCFEELCEETL
IQPTFVVDYPVEISPLAKPHRSRPGLVERFEMFCMGQELANSYSELTDPVEQRRRLEQQA
EKKNAGDEEACGVDEDFLTALEQGLPPTGGTGIGIDRLVMLLTNSASIRDVIAFPAMSTQ
QNANPDVNVGDEQMS
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgtccgtcacagccggccaacccggcactccagccgctgcacccgccaacaccataccc
cgtgcgaagattgcaaatcccgacaagcgcaacaagcagaagcaaaaccagaaccagaag
ccttccactgccgcagagttgcgcgccgcccgtctggagaaagtcgctgccatgcgcgcc
gcgggcgtcgagccgtacgcctacaccttcaacgcaacggacacagcatctgctttgcag
gatcgctacaaagaccttgtcgacggcgaggaggctgaggacggctgcgagattgccatc
gctggccgaatcatgatccgtcgcgtgtttggaaagctcgccttcttcacactccaggac
aagtcagggaccatccagctgtatctcgacaagaagtaccttgattcgagcatgggcgct
ggtagctttgccaacatcaaggcgtggacggatggcagcgatattatcggcgtgcgcggg
gtggcgaagcgcacggagaagggcgagcttagcgtcaaggtttcgcattgggagatgctc
accaagagcctcaccccgcttccggacaagtttcacggctttacggatgtggagaaacgg
taccgagccagacatgttgaccttatagtcaacccagacgtccgcgagacgtttcggaag
cgcgctaagattacgtccgcaattagaaggtttttggataatatcggctttttggaaatg
gagacgccggccttgcacagagaacctggtggggcggaagcgaagccgttcacgacgttt
cataatgccctcgatcaggagcttactttgcgcattgccacggagctccatttgaagcgg
cttgttgtcggtggttttgataaggtgtatgaactggggcgactgtatcggaacgagggg
gtcagctcaaggcataaccctgagttcacaagcattgagatttatgaggcttatacagac
tactttcgcacaatgcagctcacagaggagcttatttcgtcggtagcgcaacaggtgctc
gacacgacgaccgtggaataccaaggaaaccagattgatttgtctacgccgtggcgtcgg
gtgacaatgcatgacattgtcaaagaggcgactggtacagatttttcggtcataaccgat
gtcgaggaggctaaagacatggcaagaaattcatccgtgagtcaggacgctctgaacaaa
gctcagagcgttggcgaggttttgaacgtttgttttgaggagctctgcgaagagacactg
atacaaccaacatttgtggtggattatcccgtcgagatcagtccgctagccaaaccgcac
cgatcacggccagggctagtggagcggtttgagatgttctgtatgggacaagaacttgcc
aactcgtactcagaactgacggatcccgtcgagcaaagacggcgcttggaacagcaggcg
gagaagaagaatgcgggagacgaagaggcgtgtggcgtagacgaagacttcttgacggcc
ttggagcaaggcctgccgccgacaggtgggacaggtatcggaattgatcgacttgtcatg
ctgctgacgaactcggcgagtattcgcgatgtcatcgcgtttccggcgatgtccacgcag
cagaacgcaaacccagatgttaatgtgggagatgagcagatgtcgtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (40)   

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