KEGG T02895: N149

Campylobacter coli 15-537360: N149_0003

Entry

N149_0003         CDS       T02895

Symbol

gyrB

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

ccq Campylobacter coli 15-537360

Brite

KEGG Orthology (KO) [BR:ccq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccq03032]
    N149_0003 (gyrB)
   03400 DNA repair and recombination proteins [BR:ccq03400]
    N149_0003 (gyrB)
Enzymes [BR:ccq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     N149_0003 (gyrB)
DNA replication proteins [BR:ccq03032]
Prokaryotic type
  DNA Topoisomerases
   N149_0003 (gyrB)
DNA repair and recombination proteins [BR:ccq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      N149_0003 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3

Other DBs

NCBI-ProteinID:

AGZ20503

Position

2587..4899

AA seq 770 aa
MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI
EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDTYKVSGGLHGVGVS
VVNALSKKLIATVERNGEIYRQEFSEGKVISEFGVIGKSKKTGTTIEFWPDDTIFEVTEF
DYDILAKRFRELAYLNPKITINFKDNRVGKSESFHFEGGISQFVSDLNKKEALTKPIFFS
VDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTRVISNYIEANASAR
EKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSKASFEYLSKYFEEN
PIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQSKDPSESEIYLVE
GDSAGGSAKQGRERSFQAILPLRGKILNVEKARLDKILKSEQIQNMITAFGCGIGEDFDL
SKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFMNELVANGHIYLAQPPLYRYKKGQKKEI
YLKDEKALNDYLIETGIESSNYEGIGLNDLKDFLKIVAAYRSVLNELKKRFNVISVIRYL
IENPDFIKENNEELFKIVKAFLEKEGHNILNHYINENEIRIYVQTENGLEELIINDDLFS
HPLYEEANYIFNKIKDRDLSFEKDILDILDEVEKNAKKGAYIQRYKGLGEMNPEQLWETT
MDPSVRRLLKITIEDAQSANDTFNLFMGDEVEPRRDYIQTHAKDVKHLDV

NT seq 2313 nt +upstreamnt +downstreamnt
atgcaagaaaattatggtgcgagtaatattaaagttttaaaaggcttagaagctgttaga
aaacgcccaggtatgtatataggagataccaatataggcggacttcatcatatgatttat
gaagtagtggataattctatcgatgaagcaatggcaggacattgtgatactatagatata
gaaatcactaccgaaggaagctgcatcgttagcgataatggtcgtggaattcctgtagat
atgcaccctactgaaaatatgccaaccctaaccgtcgttttaaccgttcttcatgcaggg
ggaaaattcgataaagacacttataaggtttcaggaggtttgcatggtgtgggcgtttca
gttgtaaatgcactttctaaaaaacttatagctacggttgaaagaaatggagaaatttat
cgccaagaattttcagaaggtaaagtcatcagtgaatttggtgttataggaaagagcaaa
aaaacaggaactaccatagaattttggcctgatgatacaatttttgaagtaacagaattt
gattatgatattttggctaaaagatttcgtgaacttgcatatttaaatccaaaaatcact
ataaattttaaagataatcgtgtaggcaaaagtgaaagttttcattttgagggcggaatt
tcacaatttgttagtgatttaaataaaaaagaagctttaaccaaacctatattttttagc
gtagatgaagaagatgtaaatgtagaagtagctttgctttataatgatacttatagcgaa
aacttgctttcttttgtaaacaatatcaaaacccctgatggtggaacgcatgaagctgga
tttagaatgggtttaacaagagtgattagcaactacatagaagcaaatgctagtgctagg
gaaaaagactctaaaatcacaggcgatgatgtgcgcgaaggacttatcgctgtagtaagt
gtaaaagtgcctgaacctcaatttgaaggacaaactaaaggaaaacttggctcttcttat
gtgcgtcctatagtttcaaaagcaagttttgaatatcttagtaaatattttgaagaaaat
cctatcgaagcaaaagctattatgaataaagctttaatggcagctagaggaagagaagca
gcaaaaaaagcaagagaattaacgcgtaaaaaagaaagcttgagtgtaggaactttgcct
ggaaaattagctgattgtcaaagtaaagatccgagtgaaagtgaaatttatcttgtggaa
ggggattctgcaggaggttctgcaaaacaaggtagagaaagatctttccaagctatactg
cctttgcgtggtaaaattttaaatgttgaaaaagcaagattagataaaattttaaaatct
gagcaaattcaaaatatgattaccgcttttggctgtggtataggtgaggattttgatctt
tcaaaactaagatatcataaaatcatcatcatgacagatgcggatgttgatggatcacat
atacaaaccttgcttttaactttcttcttccgttttatgaatgaacttgtggctaatgga
cacatttatcttgcccaaccaccgctttaccgctataaaaaaggtcaaaagaaagaaatt
tatctcaaagatgaaaaagctttgaatgattatctcatcgaaacaggtattgaaagttct
aattatgaaggaattggcttaaatgatttaaaagattttctaaaaatcgttgccgcttat
cgctcggtattaaatgagcttaaaaagcgtttcaatgtgatttctgtgattagatatttg
atcgaaaatcctgactttatcaaagaaaataatgaagaactttttaaaatcgttaaagct
tttttggaaaaagaagggcataatattttaaatcattatatcaatgaaaatgaaattcgc
atttatgtgcaaactgaaaatggtttggaagaacttatcatcaatgatgatttattttca
caccctctttatgaagaggcaaattatatctttaataaaataaaagatcgtgatttgagc
tttgaaaaagatattttagatatcttagatgaagtagaaaaaaatgccaaaaaaggtgct
tatatccaacgctataaaggtttgggtgaaatgaaccctgaacaactttgggaaacaact
atggatccaagcgtaagaagacttttaaaaatcactatcgaagatgcacaaagtgctaat
gatacttttaatctcttcatgggcgatgaggttgaaccaagacgcgattatatccaaaca
catgctaaagatgtaaaacatttggatgtgtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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