KEGG   Caulobacter vibrioides CB15: CC_1386
Entry
CC_1386           CDS       T00049                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ccr  Caulobacter vibrioides CB15
Pathway
ccr03410  Base excision repair
ccr03430  Mismatch repair
ccr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CC_1386
   03430 Mismatch repair
    CC_1386
   03440 Homologous recombination
    CC_1386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccr03400]
    CC_1386
DNA repair and recombination proteins [BR:ccr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CC_1386
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CC_1386
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CC_1386
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH
Other DBs
NCBI-ProteinID: AAK23367
UniProt: Q9A8G8
Position
1536950..1538770
AA seq 606 aa
MPADGVTDISSSAFLGVERSLSGRAWRERPADLAVVREIQQRHGLIEPLAKALVSRGVTL
EHAEHYLRPTLKALFPDPSLFTDMDRAAEILIDALERGRPTMVFADYDVDGATSAAQLVR
WFRHMGVELPIYIPDRLTEGYGPSPAAFRKIRDGGAELVVTLDCGAAAYDAIASAGEIGL
EVVVIDHHLMREDPPAAAAVVNPNRPGCPSGQGVLAAAGVTFVLLTALNREARKRGLFTE
DRPQPDPRQWLDLVALGEVCDVTQLVGFNRALTALGLRAMGAWANPGLKALFEVGKGSGE
PSVFTAGFILGPRINAGGRVGRSDLGARLLSTDDPLEARALAEELDSLNTERKAVEAAVV
EEAAAMLERGSNFNPDAPVIVVAGDDWHPGVIGIVAGRLRERYRKPVVVIGIDRAANVGK
GSGRSQSGVNLGRAIQAAFEAGLLMAGGGHAMAAGLSIRPEMIPEFRAFLEERLAGEMEA
VGVEAVEVDALVQPRAANRALLDDFQRLAPFGPGNPEPLFALSQVRPERVSALKGGHVRM
DLVGPTGDRIKAISWRSAETPLGQRLLAGGGPLDVVGKLKPDDYMGRNGVQLEIEDAHDP
RARYAD
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgcccgccgatggtgtcaccgatatttcctccagcgcctttctgggcgtcgaacgctcg
ctgagcggccgcgcctggcgcgagcggccggccgatctcgccgtggttcgcgaaattcag
cagcgtcatggcctgatcgagcccctggcgaaggcgctggtgtcgcgcggcgtcaccctg
gagcacgccgagcattatctgcgcccgacgctcaaggccctgttccccgacccatcgctg
ttcaccgatatggaccgggcggccgaaatcctgatcgacgcgctggagcgcggtcgcccg
accatggtgttcgccgactatgatgtcgacggcgccaccagcgccgcgcagctggtccgg
tggtttcgccatatgggcgtcgagctgccgatctacatccccgaccgtctgaccgagggc
tatggcccgagcccggcggcgttccgcaagatccgcgatggcggcgctgagcttgtggtc
accctcgattgcggcgcggcggcctatgacgcgatcgccagcgccggagagatcgggctg
gaggtcgtggtgatcgaccaccacctgatgcgcgaggacccgccggccgccgcggccgtg
gtcaatccaaaccggccgggctgcccaagcgggcagggcgtgctcgcggcggccggggtg
acgttcgtgctgctgaccgcgctgaaccgcgaggcgcgcaagcgtggcctctttaccgag
gatcgaccgcagcccgacccgcgccaatggctggacctcgtcgccttgggcgaggtctgc
gacgtcacccagttggttggtttcaatcgcgcgctgaccgccctgggtcttcgggccatg
ggcgcctgggccaatcccgggctgaaggcgttgttcgaagtcggcaaaggctcgggcgag
ccgtcagtgttcacggcgggctttatcctggggccgcgcatcaacgccggcggccgggtc
ggtcgctccgatctcggtgcgcggcttctgtctactgacgatccgctggaggcgcgggcg
ctggccgaagaactcgacagcctcaacaccgagcgaaaggccgtggaggccgccgtcgtc
gaagaggcggcggcgatgctggagcgcggcagcaacttcaatcccgacgcgccggtgatc
gtggtggcgggcgacgattggcacccgggtgtgatcggcatcgtcgcgggtcgcctgcgc
gaacgctatcgcaagcctgtcgtggtgatcgggattgatcgggccgcgaatgtcggcaag
ggctcgggccggtcgcagtccggggtcaatcttggccgggcgatccaggcggcgttcgag
gccggccttctgatggccggtggcggtcacgccatggcggccgggctgtcgattcgtccc
gagatgattcccgagttccgcgcctttctggaggagcgcctggcgggtgagatggaggcc
gtgggcgtggaggccgtcgaggtcgacgccttggtccaacctcgcgcggcgaaccgtgcg
ctgctcgatgactttcagcgtctcgcgccgttcgggccgggtaaccccgaacccctgttc
gcgttgagccaggtgcggccagagcgcgtctcggcgctgaagggcgggcacgtacgtatg
gacctggtcggtccgacgggcgaccgcatcaaggcgatcagttggcgaagcgccgagacc
ccgctggggcagcgattgctggcggggggcggacctctcgacgtcgtcggcaagctcaag
cctgacgactacatgggccgaaatggcgtgcagctcgagatcgaggacgcccacgatcct
cgcgcgcgttacgcggactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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