KEGG   Cryptobacterium curtum: Ccur_06230
Entry
Ccur_06230        CDS       T00962                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
ccu  Cryptobacterium curtum
Brite
KEGG Orthology (KO) [BR:ccu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccu03016]
    Ccur_06230
Enzymes [BR:ccu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Ccur_06230
Transfer RNA biogenesis [BR:ccu03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Ccur_06230
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: ACU94339
UniProt: C7MN49
Position
729520..730719
AA seq 399 aa
MVDTIIKTDLSRLEGFHSVFITDQAELEAFAKRALDSSVLAIDTEFLREKTYYARLCLLQ
MQTDDETIIVDPFAVSDLGVLAPLFQSSSIMKIVHSGRQDLEILNREVGLLPQPLFDTQV
AAALLGHTQQIGYGSLVSAVCGVQLAKMDSFTDWSRRPLSASQISYAADDVIYLPQLYHT
MTDELERLGRIHWLDPDFAALIDPALYVDDPRDRYRRLKRVGQLSRRQLSAAREVAAWRE
KRARDRDIPRKWVMTDEQVVEACKREARTIDSLFMVRGLSDRLSTGDARTVVRCICRGLD
LEPDKWPKSDHVAYGGDVNVDAVLDAMTALVRLRARQNNIAFQTLASHSDLVKVAHGHKD
AEILRGWRREIVGAELLELLAGRISLSVQEGALKVTKHP
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggtcgatactatcatcaaaaccgacctatcgagacttgaaggatttcatagcgtgttc
attaccgaccaagctgagctcgaagcatttgctaagcgtgctcttgactcatctgtgctg
gccatcgacaccgagtttcttcgcgaaaagacctactacgcgcgcttgtgtttactccaa
atgcagaccgatgatgaaaccattattgtcgatccttttgcggtgtcagatttaggtgtg
cttgctccgctctttcagtcgtcgagcatcatgaagatcgtgcactccggccggcaagat
ctggagatactcaatcgtgaagtcggtcttttgccacagccactctttgacacgcaagtt
gctgcagcgctgttgggccacacccagcaaatagggtatggcagtctcgtttcagctgtt
tgtggtgtgcagcttgctaagatggattccttcaccgattggtcgcggcgccctctttct
gcttctcaaatctcatatgccgctgatgacgtgatatatctgcctcagctataccatacg
atgaccgatgagcttgaacggttgggtcgtattcactggcttgatcctgattttgctgcg
ctcattgacccagcgctgtacgttgatgacccacgcgatcgctatcgtcgccttaagcga
gtgggtcagctcagccggcgccagctttctgctgcacgcgaagtagcagcttggcgtgaa
aagcgcgcgcgcgaccgggatataccgcgtaaatgggtgatgaccgacgaacaggtggtt
gaggcgtgcaaacgcgaagcgcgaacgatcgatagtctgttcatggtgcggggtctttcg
gatcgtctttcaaccggggatgctcgtacggtggtgcgctgtatctgccgcggtctcgac
cttgaacccgataaatggccgaaaagcgatcatgttgcctatgggggcgatgtaaacgtc
gatgcggttctcgatgcgatgacagcacttgtacgcttgcgtgcccgccagaataatatt
gcgttccagacattggcgagccattctgatttggtaaaggttgcgcatggccacaaggat
gccgaaatcttgcgcgggtggcgtcgtgaaattgttggtgcggaattactggagctttta
gctggtcgtataagcctgagtgtacaagaaggtgccctcaaggtaacgaaacatccatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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