KEGG   Campylobacter cuniculorum: CCUN_0882
Entry
CCUN_0882         CDS       T05046                                 
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
ccun  Campylobacter cuniculorum
Pathway
ccun03030  DNA replication
ccun03410  Base excision repair
ccun03420  Nucleotide excision repair
ccun03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CCUN_0882 (ligA)
   03410 Base excision repair
    CCUN_0882 (ligA)
   03420 Nucleotide excision repair
    CCUN_0882 (ligA)
   03430 Mismatch repair
    CCUN_0882 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccun03032]
    CCUN_0882 (ligA)
   03400 DNA repair and recombination proteins [BR:ccun03400]
    CCUN_0882 (ligA)
Enzymes [BR:ccun01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CCUN_0882 (ligA)
DNA replication proteins [BR:ccun03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CCUN_0882 (ligA)
DNA repair and recombination proteins [BR:ccun03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CCUN_0882 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CCUN_0882 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     CCUN_0882 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CCUN_0882 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 HHH_5 PTCB-BRCT BRCT_2 DNA_ligase_ZBD N-glycanase_N SeqA_N RPA_interact_C
Other DBs
NCBI-ProteinID: ARJ56493
UniProt: A0A1W6BWK5
Position
875732..877681
AA seq 649 aa
MTRQEYLEKITQANEWAQAYYNKDDPLASDEEYDALIKQLRAFEEQNPTQIAPNSPTQKI
APTLQSEFHKIPHLSKMWSMEDVFNETELRAWAKRANCEKNFFIEPKFDGASLNLIYENG
KLISGATRGDGEVGEDITLNVLEIENIPKTIAYKEKIEIRGEIVILKKDFNSINEQRIKE
NQNPFANPRNAASGSLRQLDTSITKERNLKFYPWGVGENTLSFKKHSEVMNFIRELGFLK
DDFIRLCANLDEVLTSYKELLSLREQKAMMMDGMVVRIDDIELCNELGYTVKFPKFMAAF
KFPALEKTTRLLAVNLQVGRSGVITPVAALEPVNLDGVIVKSATLHNFDEISRLDVRIND
FVNVIRSGDVIPKITKVFKDRRDGLEQEIVRPQLCPVCQNELLDEKTMIKCQNLDCKARL
VNSIIHFVSKKCLNIDGLGENIVELLYEKGKISTLESIFHLKYEDFENLEGFKEKKITKL
LKAIEDSKTCELYRFITALGIEHIGEVAAKKLAKTFGKMWHKQGFEDYKNLEGFGEEMAK
SLEEFSRVNLQRIDDFYILLNLSEEKSEVVEQSPIKDKIFVITGTLSRPRDEFKALIEKF
GGKVSSSVSKKTSFVLFGKEAGSKLDRAKELNLVCLSEEEFNQMLHNAL
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgacaagacaagaatatttagaaaaaattactcaagctaatgagtgggctcaagcatat
tataacaaagatgaccctctagcaagcgatgaagaatacgatgctttaataaaacaatta
agagcctttgaagagcaaaaccccactcaaattgctcctaattcacccacacaaaaaatt
gctccgactttacaaagcgaatttcataaaataccgcatcttagcaaaatgtggtctatg
gaggatgttttcaatgaaactgaactaagagcttgggctaagagggcaaattgtgaaaag
aattttttcatcgagcctaaatttgatggggcaagtcttaatctcatctatgaaaatggc
aaacttataagcggtgctactcgtggagacggcgaggttggcgaggatattactttaaat
gttttagaaatagaaaacatcccaaaaactatagcttataaagaaaaaatcgaaattaga
ggcgagattgtgattttaaaaaaggattttaatagcattaatgagcaaagaatcaaagag
aatcaaaatccttttgcaaatcctagaaacgctgcaagtggaagtttaaggcagcttgat
acaagcatcacaaaagaaagaaatttgaaattttatccttggggggtgggtgaaaatact
ttaagctttaaaaaacacagcgaagtgatgaatttcataagagagcttggctttttaaaa
gatgattttataaggctttgtgcgaatttagatgaggttttaacttcttataaagagctt
ttaagcttaagagaacaaaaagctatgatgatggatgggatggttgtaagaatcgatgat
atagaactttgcaatgagcttggttatacggttaaatttcctaaatttatggcagctttt
aaatttccagctcttgaaaaaacgacgcgtttgttggctgtgaatttgcaagttggtagg
agcggagtgattacgcctgtggcggcgttagaacctgttaatttagatggggtgattgta
aaatccgcaactcttcataattttgatgaaatttcaaggcttgatgtgaggattaatgat
tttgtgaatgtgattagaagcggagatgtgattccaaaaatcactaaagttttcaaagac
agacgcgatggcttagagcaagaaattgtgcgtccacagctttgtcctgtatgtcaaaat
gagcttttggatgaaaaaacgatgataaaatgccaaaatttggattgtaaagcaagactt
gttaattctatcatacattttgtgtctaaaaaatgccttaatatcgatggattgggagaa
aatatcgtagagcttttatatgaaaaaggtaaaatcagcactttggagagcatttttcat
cttaaatatgaggattttgaaaatttagaaggttttaaagaaaagaaaatcactaagctt
ttaaaggcgattgaagattcaaaaacttgcgaactctatcgttttatcacggctttgggc
atcgaacacattggtgaagttgcagctaagaaacttgcaaaaaccttcggcaaaatgtgg
cataaacaaggctttgaggattataaaaatctcgaaggctttggagaggaaatggcaaag
agtttggaggaatttagccgtgtgaatctgcaaagaattgatgatttttatattttattg
aatttaagcgaagaaaagagtgaagttgtggagcaaagtcctattaaggataagattttt
gtgattacaggcacactttcgcgtcctagagatgagtttaaagctttgattgaaaaattt
ggtggaaaggtcagctcttcagtgtctaaaaaaacttcttttgtgctttttgggaaagag
gcgggttcaaaacttgatagggctaaagaattaaatcttgtttgccttagtgaagaagaa
tttaaccaaatgcttcacaatgcgttatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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