KEGG   Cupriavidus sp. USMAHM13: BKK81_15230
Entry
BKK81_15230       CDS       T04762                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ccup  Cupriavidus sp. USMAHM13
Brite
KEGG Orthology (KO) [BR:ccup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccup03019]
    BKK81_15230
   03009 Ribosome biogenesis [BR:ccup03009]
    BKK81_15230
Messenger RNA biogenesis [BR:ccup03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BKK81_15230
Ribosome biogenesis [BR:ccup03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    BKK81_15230
SSDB
Motif
Pfam: RNase_T CTD1 pP_pnuc_1
Other DBs
NCBI-ProteinID: AOZ00438
Position
1:complement(3456113..3456766)
AA seq 217 aa
MTSNTHVGAATKSVKSENNLIWLDMEMTGLAPDHDRIIEVAVVVTDSELNILAEGPVLVI
HQDNAVLDGMDNWNKGTHGRSGLIDKVKASTLTEEQAEAELLAFLKRWVPAGKSPMCGNS
ICQDRRFMARYMPKLESFFHYRNLDVSTLKELCKRWEPAVHKGFVKRQLHTALADILESV
EELRYYRTHFIRQSSAAPVAPDASAAAPAAGAAPARE
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacaagcaatacccacgtcggcgccgccaccaaatccgtcaagagcgagaacaacctg
atctggctggacatggagatgaccgggctggcgcccgaccacgaccgcatcatcgaggtg
gccgtggtggtgaccgattccgagctcaatatcctggccgagggcccggtcctggtgatc
caccaggacaacgccgtgctcgacggcatggacaactggaacaagggcacgcacggccgc
tccggcctgatcgacaaggtcaaggcctccaccctgaccgaggagcaggccgaggcggag
ctgctggccttcctcaagcgctgggttccggccggcaagtcgccgatgtgcggcaactcc
atctgccaggaccgccgcttcatggcgcgctacatgcccaagctggagtcctttttccac
taccgcaacctcgacgtgtcgaccttgaaggaactgtgcaaacgctgggaaccggccgtg
cacaagggcttcgtcaagcgccagctgcacaccgcgctggccgacatcctcgagtcggtg
gaggaactgcgctactaccgtacccacttcatccgccagtccagcgccgcccctgtcgcg
cccgacgcctccgccgccgcgcccgcggccggcgccgcgccggcccgggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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