KEGG   Cupriavidus sp. USMAHM13: BKK81_17950
Entry
BKK81_17950       CDS       T04762                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ccup  Cupriavidus sp. USMAHM13
Pathway
ccup03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccup00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BKK81_17950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccup03400]
    BKK81_17950
Enzymes [BR:ccup01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BKK81_17950
DNA repair and recombination proteins [BR:ccup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BKK81_17950
 Prokaryotic type
     BKK81_17950
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AOZ00919
Position
1:4060939..4061715
AA seq 258 aa
MQSDLFAADTPARSTAQAPAAALQAQADALPPAWRTLLAPCLSGAGWRELAAFVDGEHAS
GKRVFPHDVFHVLHLTPPDSVKVVILGQDPYHGVETVAGAEVPQAHGLAFSVPDGVRVPP
SLRNIFKEIAAEYGEAPARGASGNLEGWARQGVLLLNTVLTVEQGRAASHAKRGWEAVTD
CLIQALAGSRQKLVFLLWGSHAQAKKPLLGAGHCVLEAPHPSPLSAHRGFLGCGHFRQAN
DWLTAQGLAAVDWQAHRA
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcaatccgatctcttcgctgcggacacgcccgcccgatccaccgcccaggcccccgcc
gccgcgctgcaggcccaggccgacgccctgccgccggcctggcgcacgctgctggccccc
tgcctgtccggcgccggctggcgcgaactggccgccttcgtcgacggcgagcacgccagc
ggcaagcgcgtgttcccgcacgacgtgttccacgtgctgcacctgacgccgcccgactcg
gtcaaggtcgtgatcctcggccaggatccctaccacggcgtcgagaccgtggccggcgcc
gaggtgccgcaggcccacggactggccttctcggtgccggacggcgtgcgggtgccgccc
agcctgcgcaatatcttcaaggaaatcgccgcggagtacggcgaggcgcccgcgcgcggc
gcctcgggcaacctcgagggctgggcccgccagggcgtgctgctgctcaacacggtgctg
accgtcgagcagggccgcgcggccagccacgccaagcgcggctgggaagcggtgaccgac
tgcctgatccaggcgctggccggcagccgccagaagctcgtgttcctgctgtggggcagc
catgcccaggcgaagaagccgctgctgggggcgggccactgcgtgctggaggcgccgcat
ccgtcgccgctgtcggcgcaccgaggcttccttggctgcggccacttccgccaggccaat
gactggctgacggcccaggggctggcagcggtcgactggcaggcgcaccgcgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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