KEGG   Cupriavidus sp. USMAHM13: BKK81_20800
Entry
BKK81_20800       CDS       T04762                                 
Name
(GenBank) DNA repair exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
ccup  Cupriavidus sp. USMAHM13
Brite
KEGG Orthology (KO) [BR:ccup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccup03400]
    BKK81_20800
DNA repair and recombination proteins [BR:ccup03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BKK81_20800
    Archaeal homologous recombinant proteins
     BKK81_20800
SSDB
Motif
Pfam: AAA_23 AAA_27 SMC_N AAA_29 AAA_21 nSTAND3 ABC_tran cobW
Other DBs
NCBI-ProteinID: AOZ01809
Position
2:complement(538218..541277)
AA seq 1019 aa
MKPLWLAMQAFGPFAAREVIDFTQLGEHAFFLIHGPTGAGKTTVLDAICFALYGDTSGGE
RSAQDMRSANAAAGLRSEVELEFALGAQRYRIVRSPAQERPKLRGEGTVKEAARAQLDAL
EGGEWVSKASQPGRVDEFVRGLLGFDSTQFRQVIVLPQGRFRELLTADSKSRQAILERLF
HTELYRRVEDLLKTQAGELRRDAERIEIRRAELLQQHGLESTEALDARLAEALVQGTALH
EREGAARTALSLATLGLQQGEQAAAQLAEAAQAHAAHAALQARSAEVDAQRGRVRAAHQA
QAALPWLQRQRDAVVQGERAAQAVEAAALVLARRQEAARAAAAALAAQRERDPLRQQAQQ
QVVQLEGALTHARRLGQVRDALAAAQAAQARAATAHEQAQAQREQQEARLRQIETALETA
RATAAGAEAAALKLEAARQRTAVLAQHGEAGRACQRALAHQHAQAGRERSSAAALREARS
ALRAMEAAWLAGQAGRLAASLRAGDPCPVCGSLEHPSPSLPLEAGIEDAALEAARARVEQ
EEGEAGAAASAAQAAQAELLAAQARLAELERAVGAAGDAGAEAAARLAQQVEALEQGLAG
ARAAAAQAGTLEGQAATQRAALAAAQERLAAADTALRQSADQLAQRQGEWRAASEHVPEA
LREPEAVEQALQAARAGLAAAEAALQAAQAAEREATSALAAAGAAHGAAQAEAARQAAQV
AQAREAFAQALARAGFADAPALEAAGMEAAALERLEAALREFDLALAAAADRQARAATVA
AALQPPDLAALREAQARTQRELEALVAEQAALARAQQGLQACRQRLHELTAEAGGIEARF
AVLGRLSEVAAGNNPRRMSFQRFVLATLLDEVLEAASLRLVRMSRGRYELQRVREQGDKR
AAGGLDLEVFDHDTGLPRPASTLSGGEGFLASLSLALGLADVVQSRAGGIQLDTLFVDEG
FGTLDPESLDFAIRTLLDLQQAGRLVGVVSHVSELRERVDVRLEIRPGAQGSRAVLQLP
NT seq 3060 nt   +upstreamnt  +downstreamnt
atgaagccgctgtggctggccatgcaggccttcggccccttcgccgcgcgcgaggtgatc
gatttcacgcagttgggagagcatgccttcttcctgatccacggtccgaccggcgcgggc
aagaccacggtgctcgacgcgatctgcttcgcgctgtacggcgacacctccggcggcgag
cgcagtgcccaggacatgcgcagcgccaatgccgcggcggggctgcgcagcgaagtcgag
ctggaattcgccctgggggcgcagcgctaccgcatcgtgcgctcgccggcgcaggagcgg
cccaagctgcgcggcgagggcacggtcaaggaggcggcgcgcgcccagctcgatgccctg
gagggcggcgagtgggtcagcaaggccagccagccgggccgtgtcgacgagttcgtgcga
ggcctgctgggcttcgacagcacgcagttccgccaggtcatcgtgctgccgcagggccgc
ttccgcgaactgctgacggcggattcgaagtcgcgccaggccatcctcgagcgcctgttc
catacggagctctaccggcgcgtggaggacctgctcaagacccaggcaggcgaactgcgc
cgcgatgccgagcgcatcgagatccggcgcgcggaactgctgcagcagcatgggctggaa
agtaccgaggcgctcgatgcgcggctggccgaggcgctcgtgcagggtaccgccctgcac
gagcgcgagggcgcggcacgcaccgcgctgtcgctggcgacgcttggcctgcagcaaggc
gagcaggcggccgcgcagctggccgaggcggcccaggcccatgccgcccacgccgccctg
caggcgcgcagcgccgaggtcgacgcgcagcgggggcgcgtgcgcgccgcgcaccaggcc
caggcggcgttgccctggctgcagcgccagcgcgacgccgtggtacagggcgagcgcgcg
gcgcaggcggtcgaggccgccgcgctggtgctggcacggcggcaggaggcggcgcgcgcg
gcggcagcggcgctggcggcgcagcgggagcgcgatccgctgcgccagcaggcgcagcag
caggtggtccagctggagggtgcgctgacgcatgcgcgccgcctgggccaggtgcgcgat
gcgctggccgccgcgcaggcggcgcaggcgcgggccgccacggcgcatgaacaggcgcag
gcccagcgcgagcagcaggaggcgcggttgcggcagatcgagacggcgctggagacggcg
cgggcgaccgcggccggcgccgaggctgccgcgctcaagctcgaagccgcccgccagcgc
actgccgtgctggcgcagcacggcgaagccggccgagcctgccaacgggcgctggcccac
cagcacgcacaggccgggcgcgagcgcagcagcgcggcggcgctgcgcgaggcacgcagc
gcgctgcgtgccatggaggcggcgtggctggccgggcaggccgggcgcctggccgcgtca
ctgcgcgccggcgatccctgcccggtgtgcggcagcctggagcatccatcaccgtccctg
ccgctggaggccgggatcgaggatgcggcgctcgaggccgcacgcgcgcgggtggagcag
gaagaaggcgaggccggcgcagccgccagtgccgcgcaggcagcccaggccgagttgctg
gcggcccaggcgcgcctggccgagctggagcgtgcggtgggcgcggcgggtgacgccggc
gccgaagcggccgcgcggctggcgcagcaggtcgaggcgctggagcaagggctggccggt
gcgcgtgccgcggccgcgcaggccggcacgctggaggggcaggccgccacgcagcgcgcc
gcgctcgccgcggcgcaggagcgcctggcggcggcggacacggcgctgcgccagtcagcc
gatcaactggcgcagcggcagggcgaatggcgtgccgccagcgagcacgtgccggaagca
ttgcgcgagccggaggccgtggaacaggccctgcaggcggcgcgggccggacttgccgcg
gccgaggccgcgctgcaggccgcgcaggccgccgagcgcgaggccaccagcgccctggcg
gcggcgggcgccgcgcacggcgcggcccaagcggaggcggcgcgccaggcggcccaggtg
gcacaggcgcgcgaggctttcgcgcaggccctggcgcgggccggcttcgccgacgcgccg
gccctggaggcggcgggcatggaggcggccgccctggaaagactggaggcggcgctgcgc
gagttcgacctggcgctggccgccgccgccgaccggcaggcgcgcgccgccaccgtggcg
gcggcgctgcagccgcccgacctggccgcgctgcgggaggcgcaggcgcgcacgcagcgc
gaactcgaagccctggtcgccgagcaggccgcgctggcgcgcgcgcagcagggactgcag
gcttgccggcaacgcttgcacgagttgacggccgaggcgggtggcatcgaggcgcgcttt
gccgttctcggccgcctgtccgaggttgccgccggcaacaacccgcgtcgcatgagcttc
cagcgcttcgtgctggcgacgctgctggacgaagtgctggaagcggcttcgctgcggctg
gtgcgcatgagccgcggccgctacgagctgcagcgcgtgcgcgaacagggcgacaagcgc
gcggccggcggcctggacctcgaagtcttcgaccacgataccggcctgccgcggccggcc
agcacgctgtccggcggggaaggcttcctggcctcgctgtcgctggcgctgggcctggcc
gacgtggtgcagtcgcgcgctggcggaatccagctcgatacgctattcgtggatgagggt
ttcggcacgctcgatccggagagcctcgacttcgccatccgcacgctgctggacctgcag
caggcggggcggctggtcggcgtggtgtcgcacgtcagcgaattgcgcgagcgcgtcgat
gtgcggctggagatccggccgggagcccagggcagccgcgcggttctgcaactgccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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