KEGG   Corvus cornix (hooded crow): 104683726
Entry
104683726         CDS       T03546                                 
Symbol
SEC24A
Name
(RefSeq) protein transport protein Sec24A
  KO
K14007  protein transport protein SEC24
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104683726 (SEC24A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccw04131]
    104683726 (SEC24A)
Membrane trafficking [BR:ccw04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104683726 (SEC24A)
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS zf-Sec23_Sec24 Gelsolin Sen15
Other DBs
NCBI-GeneID: 104683726
NCBI-ProteinID: XP_039415289
Position
13:complement(9946658..9970664)
AA seq 1204 aa
MDSAMFGWTRLCSNARASSRLGRLRLGSSRFGSARCDSVVFVRVRFRSARVRLPSCPASP
AHGPAPKPQSRSRKCHVSAVRLRAPPGSSGGSIPPARAGAATRAAPSAPGRVMAQPAGAP
AGQQPYSNGPIQNQLMHSPDGQGYSPAVPGSYSHQMPAKVTPHQSSGQYSYSGSQNVSQL
NNYQGPGQTLNRPPVAAFSGSPVQQPGPVPQVLPPALQNSAAVSSAGSFPPGASPPVLSN
WQYSPTPVSQPLGAQTSHLAHVPGTGSAQPPSSLSGSTNPPGSYQYAASPGGPSLQNSYM
KPGTAPPPVTQPLTPLHPPRPPLGPPPVGVPPRPSAAIAGPPSAQSLLKSAANQEGDARS
AATDGSVVQNSYDAIEGGGLMATPHHSPAAPNLKMNRSVGYSYPALPPGYQHTSPPGAPG
MNASTLQYPDGSKHFHQPALGPNHLTASMGGLSLQQEGLRPVNLLQERNILPTTLLKAPV
PNLHEDIQKLNCNPELFRCTLTNIPQTQALLNKAKLPLGLLLHPFKDLSQLPVVTSSIIV
RCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFLYNPVTRVYGEPHKRPEVQNATIE
FMAPSEYMLRPPQPPVYLFVFDVSHNAIETGYLNTVCQTLLDNLDSLPGNTRTKIGFITF
DSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMPENLLVNLNENKELIQDLLKTLPQMFTKS
LETQSALGPALQAAFKLMSPTGGRITVFQTQLPSVGMGALKSREEPNQRATAKDIHLTPS
TDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYQSYHHKHNPVQVE
KLQKELKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQM
SVEESLTDMQVVSFQSALLYTSSKGERRIRVHTMCLPVVTTLSDVYLGADVQAITGLLAN
MAVDRSVSATLSDARDALVNAVIDSLAAYRSSVLSIQQPGLTAPHSLRLFPLYILALLKQ
KAFQTGTNTRLDERIFTMCQVKNQPLVYLMLMTHPSLYRVDNLTDEGALNINDRTIPQPP
LLQLSVEKLSRDGAYLMDAGSVMFLWIGKNCGQGFISQVLGVPNYGSIPQNMTHLPELET
AESIRTRAFISWLREQRPFFPILYIIKDESPLKSSFLQNMIEDRTESALSYYEFLLHIQQ
QVNK
NT seq 3615 nt   +upstreamnt  +downstreamnt
atggactcggctatgttcggatggactcggctgtgttcgaatgcgcgggcgtcgtctcgg
ctgggtcgtcttcggctgggttcgtctagattcggctccgctcggtgcgactcggtcgtg
ttcgtcagggttcggttccgctccgctcgggtccgcctcccctcttgcccggccagcccc
gcccatggccccgcccctaagccgcagagccgctcccggaagtgccacgtgtccgcagtg
cggctgcgcgcgccgcccggcagttccggtgggtccatcccccccgcccgggccggtgcc
gccacacgggcggctccgagcgcacccggcagagtcatggcccagcccgccggggccccc
gctggccagcagccctacagcaacggccccattcaaaatcagctgatgcattccccagat
ggccagggatacagccctgcggttccaggatcatactcccatcagatgccagcaaaggtt
actccacatcagtcttctggacagtatagctatagtggctctcagaatgtttctcaatta
aacaattaccaaggacctggccagactctcaatagaccaccagtggcagctttctccggg
tcaccagtacaacaaccaggtcctgttccacaagtgctgccgcctgcattacagaactca
gcagctgtatcatctgctggaagctttcctcctggagccagtccaccagtgctttcaaac
tggcagtacagcccgactcctgtgagtcagccacttggggctcaaacaagccatttggct
catgtgcctgggacagggtcagctcagccaccgtcatcgttatcaggaagtacaaatcct
ccagggagttatcaatatgctgcttctccggggggtccttcactgcagaacagctacatg
aagccaggaactgcacctccaccagtgactcagcctttaactccgctccaccctccaagg
ccacctttaggacctccaccagttggtgttccacctaggccatcagcagcgatagcagga
ccacctagtgcacagtctctgctaaaatcagctgcaaaccaagaaggtgatgccagatct
gctgccactgatgggtctgtagtgcaaaacagctacgatgcaattgaaggtggtggcctc
atggcaactccacatcattctcctgcagccccgaatcttaaaatgaatagaagtgttggg
tattcctaccctgccttacctccaggctaccaacatacttctccacctggagcaccagga
atgaatgcatctactttgcaatacccagatggatcaaaacatttccaccagcctgccctg
ggccctaatcacttaactgcatcaatgggtggcctgagtctacagcaggaagggttaaga
cctgtgaatcttcttcaagaaagaaatattcttcccacaaccctcttgaaggctcctgtc
cccaacttgcatgaagacatccagaagctcaactgcaaccctgagttgttccgctgtacc
ctgactaacattcctcaaactcaggccttattgaataaagccaaacttcctttggggctc
ctgcttcatcctttcaaagacttatcgcaattgccagtggtcacttccagtattattgtg
agatgccgttcctgccggacgtacattaacccttttgtcagcttcctagaccaaaggaga
tggaaatgcaatttgtgctatagagtgaatgatgttcctgaagaattcctgtataatcct
gtgacaagagtttatggagaacctcataaaagacctgaagtccagaatgctactattgag
tttatggctccatctgaatacatgctgcgtccacctcagccgcccgtgtacctctttgtg
tttgatgtctctcacaatgcaatagagacaggatacttgaatacagtctgccagaccttg
ttagacaatcttgactcgcttcctgggaacactagaacaaaaataggcttcataacgttt
gacagcacaatccatttctacagtcttcaggaaggtctttctcagcctcagatgcttata
gtttcagatattgaagatgtatttataccaatgccggaaaacttattagtaaatttaaat
gaaaataaagagctaattcaagatctgttgaagacattgccacagatgtttactaagtcc
ctggaaactcagagtgctctggggcctgcattacaggctgcctttaaactgatgtccccc
actggaggtagaatcactgtcttccagacacagctcccatctgtgggaatgggagcacta
aagtcacgagaagagccaaaccaaagagcaacagcaaaggacatacatctgacaccatcg
actgatttttacaagaagttggccttggactgctcagggcaacaggttgcagtggattta
tttcttcttagtgggcaatattctgacttggcttctctaggttgcatatcaaggtattct
gcaggtagtgtctactactaccagtcttaccatcataaacacaaccctgtccaggtggag
aaattgcaaaaagaactgaagcgatatttaactagaaaaattgggtttgaagctgtcatg
aggataagatgcaccaaaggtctctccattcatactttccatgggaacttctttgtacga
tctacagacttgttgtcattacccaatgtaaacccagacgcaggatatgctgtgcaaatg
tcagtggaagagagtcttactgatatgcaagttgtttcttttcagtcagctctcctgtac
acctccagcaaaggtgaaagacgaattcgtgtccacaccatgtgcttacctgttgtcaca
acactgagtgatgtgtacctaggagcagatgtgcaggccatcacagggctcttagccaac
atggctgtggaccgctccgtttctgctacgctgagcgatgctcgggatgccttggtcaat
gcagtgatagattctttagctgcttatcgctcatccgtgctgagcatccaacagcctggg
ctcacagctccacactcgctgcggctcttcccactttatatactggcactcttaaaacag
aaagcatttcaaactgggacaaacacacgtttggatgaacgcatctttaccatgtgtcag
gtgaaaaaccagccccttgtttacctcatgctcatgacgcatcccagtctgtacagagtt
gataatctcacagatgagggggctcttaacataaatgacagaactatacctcagccaccc
cttctccagctgtcagtggagaagctgagtagggatggtgcttatcttatggatgctggc
tctgtgatgtttctgtggatcggaaagaactgtgggcagggctttatcagccaagtcctt
ggagttccaaattatggctcaataccacagaatatgacacatctcccagaacttgaaact
gcagaatccatcagaacacgagctttcatttcttggctgagagaacagagacctttcttt
cctatactatatataataaaggatgagagtccattgaaatcaagttttctgcaaaatatg
attgaagacagaacagaatcagccttatcatactatgaattcctccttcatatacagcag
caagtgaataaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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