KEGG   Corvus cornix (hooded crow): 104686240
Entry
104686240         CDS       T03546                                 
Symbol
KDM6A
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccw03036]
    104686240 (KDM6A)
Enzymes [BR:ccw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     104686240 (KDM6A)
Chromosome and associated proteins [BR:ccw03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     104686240 (KDM6A)
   Histone demethylases
    104686240 (KDM6A)
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_2 TPR_16 TPR_17 TPR_8 TPR_12 TPR_19 TPR_9 TPR_7 TPR_11 ANAPC8 ANAPC3 SNAP
Other DBs
NCBI-GeneID: 104686240
NCBI-ProteinID: XP_039408467
Position
1:111970064..112122012
AA seq 1483 aa
MKSCGVSLAAAASAAPFGDEEKKMAAGKASGQSEEDFASLTAQEREALSGLDSRLFGFLR
LHEDGARTKALLLKAVRCYESLILKAEGKVESDFFCQLGHFNLLLEDYPKALSAYQRYYS
LQSDYWKNAAFLYGLGLVYFHYNAFQWAIKAFQEALYVDPSFCRAKEIHLRLGLMFKVNT
DYESSLKHFQLALIDCNPCTLSNAEIQFHIAHLYEIQLSAFHEHQLKIFSTNFPLFHLKR
KYHSAKEAYEQLLQIENLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQYLQKSLEA
DPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQ
AYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKNCSNTSALAARIKYLQA
QLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQACKPHHPNTEPVLGLT
QTPISQQSLPLHMIPSSQVDDLTSPAKRKRTSSPTKNTSDVWSSGHTVSHPPVQQQIHSW
CLTPQKLQHLEQLRANRNNLNPAQKLMLEQLESQFVLMQQHQQMRQTGVAQVRSTGIPNG
PTADSSLPTNSVSGQQPQVALTRVPNVAQRGIRPACPGQPMANGPFPAGPIPCSTARTLG
STDTILIGNNHITESGSNGNVPYLQRNALSLPHNRTNLTSSAEEPWKNQLSNSTQGLHKG
QSSHLAGPNGERPLSSTGPSQHLQAAGTGIQNQNGHPATPSNSVTQGAALNHLSSHTATS
GGQQGITLTKESKPSGNTSAVPETSRHSGETPNSTASVEGLPNHVHQVTADAVSSPSHGD
SKSPGLLSSDNPQLSALLMGKANNNVSTGTCDKVNNIHPAVHTKTENSVASSPSSAISTA
TPSPKSTEQTTTNSVTSLNSPHSGHTVNGEGLEDSQSPMKADPPPISHKPSPQIIPSMSV
SIYPSSAEVLKACRNLGKNGLSNSSILLDKCPPPRPPPPPYPPLPKDKLNPPTPSIYLEN
KRDAFFPPLHQFCTNPNNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQP
ADENWDPTGTKKIWRCESSRSHTTIAKYAQYQASSFQESLREENEKKSHHKDHSDNESTS
SDNSGRRRRGPFKTIKFGTNIDLSDDKKWKLQLHELTKLPAFVRVVSAGNLLSHVGHTIL
GMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPESYWGVMNDFCEKNNMN
FLMGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTAC
QYKLAVERYEWNKLQSVKSIVPMVHLSWNMARNIKVSDPKLFEMIKYCLLRTLKQCQTLR
EALIAAGKEIVWHGRAKDEPAHYCSICEVEVFDLLFVTSESNSRKTYVVHCQDCARKIST
NLENFVVLEQYKMEDLMQVYDQFTLRSPEDHNWIRWRWEESGQ
NT seq 4452 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcgccgccgccgcctctgctgctcctttcggtgatgag
gaaaagaaaatggcggcggggaaagcgagcggccagagcgaggaggacttcgccagcttg
acagcccaggagagagaagccctatccggcctcgacagccggctcttcggatttctgagg
cttcatgaagatggcgccagaacgaaggccttgctgttaaaggctgttcgctgctatgaa
tcgctaattttgaaagctgaaggaaaggtcgagtctgatttcttttgtcagttaggtcac
ttcaacctcttattggaagattatccaaaagcattatctgcataccagaggtactacagt
ttacaatctgactactggaagaatgctgcctttttatatggccttggtttggtctacttc
cattacaatgcctttcaatgggcaattaaagcatttcaggaggcgctttatgttgatccc
agcttttgtcgagccaaggaaattcatttgcgacttgggcttatgttcaaagtgaacaca
gactatgagtctagtttaaagcattttcagttagctttgattgactgcaacccctgcact
ttgtctaacgctgaaattcagtttcacattgcccacttatatgaaatccagttgtctgca
tttcatgaacaccaattaaaaatcttttctaccaacttccccttgttccatttgaaaaga
aagtatcactctgcaaaggaagcttatgaacagcttttgcagatcgaaaaccttcctgca
caagtaaaagcaactgtcttacagcagttaggctggatgcatcacaccgtggatcagctt
ggggacaaggcaaccaaggaaagctatgctatacagtatctccagaaatctctagaagca
gatccaaattctggtcaatcctggtatttccttggaaggtgctattcaagtattgggaaa
gttcaggatgcctttatatcttataggcaatctattgataaatcagaagcaagtgcagat
acatggtgttcaataggtgtgctgtaccaacagcaaaatcagcctatggatgctttacag
gcctatatctgtgctgtacaattggaccatggccatgctgcagcctggatggacctaggc
acactctatgagtcctgcaaccagcctcaggatgccattaaatgctacttaaatgcaact
aggagcaaaaattgtagtaatacctctgcacttgcagcacggataaagtatttacaggct
cagttgtgtaaccttccacaaggtagtctacagaataaaactaaattacttcctagtatt
gaggaggcatggagcctaccaatccccgcagagcttacctccaggcagggtgccatgaac
acagcacagcaggcttgtaaacctcatcatccaaatactgaacctgtactaggcctcact
caaacaccaatttcacagcaatccttgccactacacatgattccttctagccaagtagat
gacctgaccagtcctgccaagaggaaaagaacatctagtccaacaaagaatacttcagat
gtttggagcagtggccatacagtgtcacatcctcctgtacagcaacaaattcattcttgg
tgtttgacaccacagaaattacagcacttggaacagctgcgtgcaaaccgaaataatcta
aatccagcacagaaacttatgctggaacagctggagagtcagtttgtcttgatgcagcaa
caccagcagatgagacaaacaggagttgcacaggtacgatctactggaattcctaacggg
ccaacagctgattcatcactgcctacaaactctgtctctggccagcagccgcaggttgct
ctgaccagagtgcctaatgtcgctcagcgtggaatccgtcccgcctgccccgggcagcct
atggctaatggaccctttccagcaggccccattccctgcagcacagcaagaacgctgggt
agtacagacactattttgataggcaataatcacataacagaaagtggaagtaatggaaac
gtgccttacctgcagcgaaacgcactctctctacctcataaccgcacaaacctgaccagc
agcgcagaggagccgtggaaaaaccaactatccaactccactcaggggcttcacaaaggt
cagagttcacatttggcaggtcctaatggtgaacgacctctctcttccactgggccttcc
cagcatctccaggcagctggcactggtattcagaatcagaatggacatcctgccacgcct
agcaattcagtgacacagggggctgctctcaatcacctctcctctcacactgctacctca
ggtggacaacaaggcattaccttaaccaaagagagcaagccttcaggaaacacatcagca
gtgcctgaaacaagcaggcattctggagagacaccaaacagcactgccagtgtagaggga
cttcctaatcatgtccatcaggtgacggcagatgctgtttctagccctagccatggagat
tctaagtcaccaggtttacttagttcagacaatcctcagctctctgccttgttgatggga
aaagccaataacaatgtgagtactggaacctgtgacaaagtcaataacattcatccagct
gttcatacaaagactgagaattctgttgcctcctcaccatcttcagccatttccacagca
acaccttctccaaaatctactgaacagactaccacaaacagtgttaccagccttaacagc
cctcacagtggacatacagttaacggagaggggttggaggactctcagagccccatgaaa
gcagatcctcctccaattagccacaaacctagtcctcagatcataccatcaatgtcggtg
tccatataccccagctcagcagaagttctaaaagcatgtcggaatctgggtaaaaatggc
ttatctaacagtagtattctattggataaatgcccacctccacgaccaccacctccaccg
taccctcccttgccaaaggacaagttgaatccacctacacctagtatttatttggaaaat
aaacgagatgctttctttccacctttacatcaattttgtacaaatccaaacaaccccgtt
actgtaatacgtggccttgctggagcgcttaaattagatctaggactcttctctactaag
acattggtagaagcgaataatgaacacatagtagaagtaaggacacaactactgcagcca
gcagatgaaaactgggaccccactggaacaaagaaaatctggcgttgtgaaagcagtaga
tctcatacaacaattgctaaatatgcacagtaccaggcctcctcattccaggagtcttta
agggaggaaaacgagaagaagagtcaccacaaggaccactcagataatgaatccacatct
tctgataactctgggaggaggagaagaggaccttttaaaacaatcaagtttgggaccaac
attgacctgtcagatgacaagaagtggaagttgcaactccatgaactgacaaaacttcct
gcttttgtacgtgtggtatcagcaggaaatcttctaagccatgttggtcataccatcctg
ggcatgaacacagtgcagctctacatgaaggttccaggtagcaggacaccaggtcatcaa
gaaaataacaacttttgctcagtaaatataaatattggtccaggtgactgtgaatggttt
gttgtccctgaaagctattggggtgtcatgaatgacttctgtgaaaagaacaatatgaat
ttcctaatgggatcttggtggccaaacttggaagatttgtatgaagccaatgtcccagtt
tatagatttattcaaagaccaggggatttggtgtggataaatgctggcactgttcactgg
gttcaggctattggttggtgcaacaacatcgcatggaacgttggccctctcacagcctgt
cagtacaagttggcagtggaacggtacgagtggaataagctgcagagcgtgaagtccata
gtacccatggttcacctttcatggaatatggctcggaatatcaaggtctcagatccaaag
ctttttgaaatgataaagtactgcctgttaagaactctcaaacagtgtcagacactgagg
gaagctctgattgctgcaggaaaggagattgtctggcacggacgagcaaaggacgagcca
gctcattactgtagcatttgtgaggtggaagtctttgatctgctttttgtcactagtgag
agcaattctcgaaagacctatgttgtacattgccaagactgtgcacgaaagataagcacg
aacctggaaaactttgtggtgctagaacagtacaaaatggaggacttgatgcaagtctat
gatcaatttacattaagatcacctgaagaccataactggatcagatggagatgggaagaa
tcaggacagtga

DBGET integrated database retrieval system