KEGG   Corvus cornix (hooded crow): 104687128
Entry
104687128         CDS       T03546                                 
Symbol
USP5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccw01002]
    104687128 (USP5)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccw04121]
    104687128 (USP5)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccw04147]
    104687128 (USP5)
Enzymes [BR:ccw01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104687128 (USP5)
Peptidases and inhibitors [BR:ccw01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104687128 (USP5)
Ubiquitin system [BR:ccw04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104687128 (USP5)
Exosome [BR:ccw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104687128 (USP5)
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 UBA_4 UBA_3
Other DBs
NCBI-GeneID: 104687128
NCBI-ProteinID: XP_039416479
Position
1:28238741..28253542
AA seq 855 aa
MAELSEALLSVLPSIRVPKAGDRVHKDECAFSFDTPESDGGLYICMNTFLGFGKQYVEKH
YQKTGQRVYLHLKRTRKPKEEDTNSSAGDPPRKKPTRLAIGVEGGFDITEEKFEYDEDVK
IVIFPDHLDIPRDGLEGLPDMVKDRIASAIEAILTADSASRKQEVQAWDGEVRRVSKHAF
SLHQLQNDVRIPPCGWKCSKCDMKENLWLNMTDGAILCGRRYFDGSGGNNHAVEHYRETG
YPLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLAHFGIDMLKMQKTDKTMTELEIDMN
QRIGEWELIQESGVQLKPLYGPGYTGIRNLGNSCYLNSVMQVLFSIPDFQRKYVDKLEKI
FQSAPSDPTQDFSTQVAKLGHGLLSGEYSRPASADGEQQPDQKGMQNGIAPRMFKSLIGK
GHPEFSTNRQQDAQEFFLHFINMVERNCRSSENPNEVFRFLVEEKLKCLATEKVKYTQRV
DYIMQLPVPMDAALNKDELLEYEEKKRQAEEEKQPLPELVRAKVPFSSCLEAYGAPEQVD
DFWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDISALQ
GMGLQDGEEEMPDIAPPLVTPDEPKGSLGFYGNEDDDSFCSPHFSSPTSPMLDESVIIQL
VEMGFPMDACRKAVYYTGNSGVEAAMNWVMSHMDDPDFANPLVLPGSSGPGSTIACPDPP
SEDSVATIVSMGFSRDQAMKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAAES
ISESIPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKDGRWVIYNDQKVCASEKP
PKDLGYIYFYQRIPS
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggcggagctgagcgaggcgctgctgtcggtgttaccgtccatccgggtgcccaaggcc
ggcgaccgcgtccacaaggacgagtgcgccttctccttcgacacgccggagtcagatggc
ggcttgtatatctgcatgaacacgttcctgggctttgggaagcagtatgtggaaaagcac
tatcagaaaacaggccagcgggtctacctgcacctcaaaagaacacgtaaaccgaaggaa
gaagacaccaactccagtgctggggaccccccaaggaagaaaccaactcgcttggctatt
ggtgtagaaggtggatttgacatcacagaagaaaagtttgagtatgatgaagatgtaaaa
atagtaattttcccagaccatttggatattccacgtgatgggctggagggactaccagac
atggtcaaagacaggattgccagtgcgattgaggccatcctgacagcagattcagcctca
cggaagcaggaggtgcaggcttgggatggggaggttcgacgtgtttccaagcacgctttt
tccctgcaccagcttcagaacgatgtccgcatcccaccgtgtggctggaagtgcagcaag
tgtgacatgaaggagaacctgtggctgaacatgactgacggagccatcctctgtggtcgg
cgctactttgatggcagtggtggcaacaaccacgccgtcgagcactaccgagaaaccggc
tacccgctggctgtgaaactgggaacaattactcctgatggggctgatgtctactcctat
gacgaggatgacatggtgttggatcccaacctggcagaacacctggcacactttgggatt
gacatgcttaagatgcagaagacagacaagacaatgacagaactggaaatagacatgaac
cagcgcattggggagtgggagctcatccaggagtctggcgttcaactcaagcccctctat
gggcctgggtacactggtatccgtaacctgggcaacagttgctacctcaattctgtgatg
caggtgctgttcagtatcccagacttccagagaaagtatgtggacaaactggagaagata
ttccaaagtgcaccttcggaccccacacaggatttcagcacacaagtagccaaactgggc
catggactgctttctggggagtattcaaggccagcttctgcagatggggagcagcagcct
gatcagaagggtatgcaaaatggcattgctccacgcatgtttaagtccctcatcggaaag
gggcacccagaattttccactaaccgacagcaagatgcccaggaattctttctgcacttc
atcaacatggtggagaggaactgccgcagctcggagaaccctaatgaggtcttccgtttt
ctggtggaggagaagctgaagtgcctggccacagaaaaggtgaaatatacccagcgtgtg
gactatattatgcagctgcctgtgcccatggatgctgcactcaacaaagatgaactgctg
gaatatgaggagaagaagaggcaggcagaggaggagaagcagccactgcctgagctggtg
cgagccaaggtgcctttcagctcctgcctagaggcctatggagctccagagcaggtggat
gatttctggagcacagccttgcaggccaagtctgtggctctcaaaacgacacggttcgcc
tctttcccagattatctggtcatccagatcaagaagttcactttcggtctggactgggtt
cccaaaaagcttgatgtttccattgaaatgccagaggagctggatatctctgcactgcag
ggaatggggctgcaggatggagaagaagaaatgccagacatcgcacccccactggtgaca
ccagatgagcccaaaggtagcctggggttctatggcaacgaggacgacgactccttctgc
tcccctcacttctcctctccgacatcacccatgctggatgagtcggtgattatccagcta
gtggaaatgggctttcccatggatgcctgccgcaaagccgtgtactacacagggaatagt
ggggttgaggcggccatgaactgggtcatgtcacatatggacgatccagactttgctaac
ccattagttctccctggatccagtggaccagggtcaactattgcctgcccagaccctcct
tcagaagacagtgtagccaccattgtctccatgggcttctcccgggaccaggctatgaaa
gcacttagggccacgaacaacagtctggaacgtgctgtggattggatctttagtcacatc
gatgacctcgatgcagaagctgctatggatatctcagaggggcgctcggcagccgaatcc
atctctgaatccatccctgtgggtcccaaagtgcgcgatgggcctggaaaatatcagctg
tttgccttcatcagccacatgggtacttcaactatgtgtggacattatgtttgtcacatc
aagaaagatggcaggtgggtgatctacaatgaccagaaagtctgtgcttctgagaagccc
cccaaggacctgggctacatctacttctatcagcggattcccagctag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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