KEGG   Corvus cornix (hooded crow): 104690000
Entry
104690000         CDS       T03546                                 
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
  KO
K12190  ESCRT-II complex subunit VPS36
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104690000 (VPS36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccw04131]
    104690000 (VPS36)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccw04147]
    104690000 (VPS36)
Membrane trafficking [BR:ccw04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    104690000 (VPS36)
Exosome [BR:ccw04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104690000 (VPS36)
  Exosomal proteins of colorectal cancer cells
   104690000 (VPS36)
SSDB
Motif
Pfam: EAP30 Vps36_ESCRT-II GRAM BBL5
Other DBs
NCBI-GeneID: 104690000
NCBI-ProteinID: XP_039423014
Position
1:complement(53138567..53159191)
AA seq 386 aa
MDRFSWTTGLLELGETLVVQQRGVRLSDGEEKLKFDSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWESIPTGQAMQVNKDSQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggacaggttctcgtggaccaccgggctgctggagctgggagagacgctggtggtccag
cagcgcggcgtgcgcctcagcgacggggaggagaagttgaaattcgatagtggagtttta
ctgctgagcacacaccgactgatctggagggatcagaagaatcatgagtgctgcattgct
gtacctctgtctcagattgtgtttattgaagagcaagcagctgggataggaaaaagtgcc
aaaatagtagttcatcttcatcctgcttcttcaaacaaagaacctggtccattccaaagc
agcaaatattcctacatcaagctttctttcaaagaacatgggcagattgagttctataga
cgattatcagaagaaatcacacaaaggagatgggagagcatacccactggtcaggccatg
caagttaacaaggattcacaggcaggaagaataagggctgtaggaattgtaggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttctgaggcttttgaggac
cttagcaaactaatggagaaggctaaggaaatggtggagttatccaagtcaatagctaat
aagattaaagaaaaacaaggtgacatcactgaggatgagaccattaggttcaagtcctat
ctactgagtatgggtatagctaatccagttacgagggaaacatatggatctggtacacag
taccacatgcagctggcgaagcaactggctggaatcctgcagacacccttagaggagcga
ggggggatcatgtctcttacagaagtgtactgcctggtgaatcgtgctcgagggctagag
ttgctgtccccagaagatttagtgaatgcttgtaaaatgctggaatcactgaaattgcca
ctaaggcttcggatatttgatagtggtgtgatggtgattgagctccagtctcataatgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacacaaagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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