KEGG   Corvus cornix (hooded crow): 104690005
Entry
104690005         CDS       T03546                                 
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein
  KO
K06618  retinoblastoma-associated protein
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04110  Cell cycle
ccw04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104690005 (RB1)
   04218 Cellular senescence
    104690005 (RB1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccw01009]
    104690005 (RB1)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccw03000]
    104690005 (RB1)
Protein phosphatases and associated proteins [BR:ccw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104690005 (RB1)
Transcription factors [BR:ccw03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    104690005 (RB1)
SSDB
Motif
Pfam: Rb_C RB_A RB_B DUF3452 TFIIB DUF1955
Other DBs
NCBI-GeneID: 104690005
NCBI-ProteinID: XP_039423501
Position
1:complement(54755759..54827025)
AA seq 919 aa
MPPKPPRRAGAARTQRHSPDGGSAPPAAPRLEVGEADFVVLCDALKVSDSVREKAWKTYE
SLSAADGALACNKKKKETWGVCIFIVAIDLDEVTFTFTELLKSINISVCTFFQFLKEVDV
NMDTVSTKVDSTVSRLKKKYDVLFALYRKFERTCGLIYLEQPSSEISAELSSVLVLKNYW
ITFLLAKGKVLQVEDDLVISFQLLLCVLDYFIKLSPPAMLKEPYKSSVSAVTVNGSARTP
RRGQNRSSRTAKQLDTDTKIIEILCKEHDCNLDEVKNVYFTSFIPFLNSAGIVASNGLPE
VEVILKQYDELYLKNKDIDARLFLTHDETLQPAVIACSQLERTPLKNNSDEEVNIMLPQT
PVRAAMNNIQQLIMILNSATDKPSDTLIMYFNNCTVNPKDSILKRVESFDHIFKKKFAEA
VGQGWAEIGSQRYKLGVRLYYRVMESMLKSEEERLSVQNFSKLLNDNIFHTSLLACAVEV
VMATYGRNASQSDSTSAETDLSFPWILNVFDLKAFDFYKVIESFIRAEPSLTREMIKHLE
HCEHRIMESLAWQSGSPLFDLIKQSKEREGQADQPEPTSTLNMPLQHNHTAADLYLSPVK
SPKKKASGPPLSAASTPDVQPAVIPQTQKPQKSTSLSLFYKKVYLLAYRRLHTLFLHLLS
EHPDLEPLIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNVDLRFKIIVSAYKEL
CNTNQETFKRVLIREEQYDSIIVFYNLVFMQKLKTNILQYASSRPPTLSPIPHIPRSPYQ
FSNSPRRVPAGNNIYISPLKSPYKFSDGFQSPTKMTPRSRILVSIGESFGTSEKFQKINQ
MLCNSECQLKRSAEVGAAAPKPLKRLRFDIEGQDEADGSKHLPQESKFQQKLAEMTSTRT
RMQKQKLNDGNDTSASEEK
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgccgcccaagcccccgcgcagggcgggcgccgccaggacccagcgccacagccccgac
ggcggctccgcgccgcccgccgccccccggctcgaggtcggcgaagcggacttcgtcgtg
ctctgtgatgcgctgaaggtgtcggacagcgtgagggagaaagcgtggaagacgtacgag
agcttgtcggcagcggatggagctctagcttgtaacaaaaagaaaaaggaaacatgggga
gtatgtatctttattgtagcaattgatctggatgaagtgacatttactttcactgagctt
ttgaaaagtataaacataagtgtatgcacattttttcagtttctgaaagaggtggatgtt
aacatggatactgtaagcactaaagttgatagcactgtatcaaggctgaaaaagaaatac
gatgtattatttgcactataccgcaagtttgaaaggacttgtggccttatttatctggaa
caacctagtagtgagatttctgctgaactcagttctgtattagtcctaaaaaattactgg
attacttttttactggcaaaaggtaaagtgttgcaagtggaagatgacctggtgatttct
ttccagttgttgctgtgtgtcttagattattttatcaaactgtcacctcctgctatgctc
aaggaaccatacaagtcttctgtgtctgcagtgactgtaaatggttcagctcgcactcca
agaagaggccagaacaggagttcgcgtactgcaaagcagcttgatacagatacaaaaatt
attgaaatcctttgtaaagagcatgattgtaatttagatgaggtcaaaaatgtgtatttc
acaagcttcattcctttcttgaattctgctggtattgtagcttcaaatggactaccagag
gttgaagttatcttgaaacagtatgatgagctctatctcaaaaacaaagatatagacgca
agactatttctgacccacgacgaaaccctgcagcctgccgtcatagcatgctcacagttg
gagaggacaccactaaaaaacaattcagatgaggaagtcaatattatgcttccacagact
cctgttcgagcggcaatgaataacattcagcaattgattatgattttaaactcagcaact
gataaaccatcagatactctcatcatgtatttcaataattgcacagtgaaccctaaggat
agtatcctgaaaagagtggaaagttttgaccacatcttcaaaaagaaatttgctgaagca
gttggacaaggatgggctgaaattggctcacagaggtacaagcttggggtgcgtctgtat
tacagagtaatggagtccatgctgaagtcggaggaagagcgcctctcagtgcagaatttc
agcaaacttctgaatgataacatcttccacacatctcttctggcgtgtgctgttgaggtt
gtcatggctacgtatggcagaaatgcttcacaaagtgacagtaccagtgctgaaacagac
ttgtctttcccatggattctcaatgtatttgatttaaaagcttttgacttctacaaggtg
atcgaaagctttattagagcggagcccagcctaacacgggaaatgataaagcatctagaa
cactgtgaacatcgaattatggagtctctcgcttggcagtcggggtcgcctctgtttgat
cttatcaagcagtcaaaagagcgagaaggtcaagctgatcagcctgaacccacttctact
ctcaatatgcctctccagcataaccacactgctgcagacctctatctttctcctgtgaaa
tctcctaagaagaaagcatctggacctcctctaagtgctgcttccactccagatgttcag
cctgctgtgatcccccaaacacagaaaccacagaaatctacctccctctctctgttctac
aagaaagtgtatctactggcctatcgtcgactccacaccctgttccttcaccttctctcc
gaacatcctgacctggaacccttaatctggaccctcttccagcacaccctgcaaaatgag
tatgagctaatgagagacaggcacctggaccagatcatgatgtgttccatgtatggcata
tgcaaagtgaagaatgtagatcttcgatttaaaataatagtttcagcatacaaggagctt
tgcaacacaaatcaagagactttcaaacgtgttcttatccgtgaagaacagtatgactcc
atcatagtcttttacaacttagtgtttatgcagaagctgaaaacaaacattttgcagtat
gcttccagcaggcctcccactctgtcacctatcccacatattcctcgcagtccttaccag
ttttccaactctcctcggcgtgttcctgctggcaataacatctacatctcacctctgaag
agcccatacaaattctctgatgggtttcagtcacccacaaagatgactccaaggtctaga
attttggtgtcaattggagaatcatttgggacttctgaaaagtttcaaaaaataaaccag
atgttgtgcaacagtgagtgccagctgaagcgcagtgcagaagtaggtgctgctgccccg
aagccactgaagaggctgcgctttgatatagaggggcaagatgaggcagatggaagcaaa
cacctaccccaggagtccaagttccaacaaaagcttgcagaaatgacatctactcgaaca
agaatgcaaaagcagaagctcaatgatggaaatgatacctcagccagtgaagaaaagtga

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