KEGG   Corvus cornix (hooded crow): 104690043
Entry
104690043         CDS       T03546                                 
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03440  Homologous recombination
ccw04068  FoxO signaling pathway
ccw04110  Cell cycle
ccw04115  p53 signaling pathway
ccw04210  Apoptosis
ccw04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    104690043 (ATM)
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    104690043 (ATM)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104690043 (ATM)
   04210 Apoptosis
    104690043 (ATM)
   04115 p53 signaling pathway
    104690043 (ATM)
   04218 Cellular senescence
    104690043 (ATM)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ccw01001]
    104690043 (ATM)
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccw03032]
    104690043 (ATM)
   03036 Chromosome and associated proteins [BR:ccw03036]
    104690043 (ATM)
   03400 DNA repair and recombination proteins [BR:ccw03400]
    104690043 (ATM)
Enzymes [BR:ccw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     104690043 (ATM)
Protein kinases [BR:ccw01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   104690043 (ATM)
DNA replication proteins [BR:ccw03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    104690043 (ATM)
Chromosome and associated proteins [BR:ccw03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    104690043 (ATM)
DNA repair and recombination proteins [BR:ccw03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    104690043 (ATM)
SSDB
Motif
Pfam: PI3_PI4_kinase FAT TAN FATC HEAT TTI1 ParBc_2
Other DBs
NCBI-GeneID: 104690043
NCBI-ProteinID: XP_010398862
Position
1:43265898..43325882
AA seq 3066 aa
MSLALHNLLVCCRRLENEKAVERRKEIENFKRLLRDSETVLQLDRNSDSKQGKQLNWDAV
FSVLQKYFQKELKNLQLTKPNASASTQTTRQKKIQEVGSLVKYFIRCANKRGPRLKCQEL
LIYVMEIIRDPTSCAAYGSDCSSILLKDILSVRKYWCEISQQQWSELLTLYAHLYLESSG
NINRVLVARIIHTLTRGYCFQTDGLSSDMLVFFSKATQSARQEKNTAGLDHIVGAMNIFC
HKFADNCRIRICKVGEEILPTVLYIWTQYRPKDSLKESIIELFRLQVHIHHPKGAKTQGR
GAYDLTKWQSILHNLYDLLLNEINLISSRGKYSSVSRNVAVKENLIELMADICHQVFTED
TKVLEITQSYAVSQRESCEGTVPNKRRRIELGWGVIRDNVQRSQKDFDVIPWLQITSQLI
SKYPMSLPNSELPALLNVLHQLLPQQRRGERTPYVLKCLTEVALCQNQKTDLKSTLKLEL
QRTWAKIWTLTIRSVSLQQIEAESFGLLGAMIQGNLVVTDKELWKIFSGPACKPSSSAVC
CLSLVMSTCSVPENLDIGMEQNNSERNLGSVLREAIMKWLLSSCLEEEIEECAELPPVLC
SDFPHLVLQKILVSLTMKNCRAAIIFFLNEAKCEQHVQGKEENNFSDVEELYLQTTFDEM
DIFTNFAVNVTDKNVTGSRLAINQNLRETLENCLLAMSEKLLSSCGPKSKVVAAEHLVRC
VSLLVGVLGCYCYTGIFKEEDACKSALFQNAKSLIHYAGESISQSKNKLNEDTQINMLRT
LIVQCTKCLCNCTKSSANKMLSNIFLRLLTSKFMNDLIDICKNLMTVTGKPNVLGEVDLR
NDPEESIMEVDNWVSDDLFDDHSVTDISDTNESGDMQSVTGALSPLAEEQLTKQDLLLLE
IVRFLCICVTTVRVQTVSFRASDIRRRLLMLTEGSVFDSTKPLHLHMYLILLKELPTEEH
LLPAVDVDMLLKPLSTVCSLYRRDQEVCKVILNNLLPIAVGLTQLDEHAEETGNAKGQFL
TVVGAFWHLSQGGKCTASVRVALLNCMKTLLEVDPLCKWAILNVKNEDLPVSDAFPHFLA
DSHHQVRILAARSITSLFQDVKQRDSSGMSKPLPLKLQQKAFENAYLRVQEGMSNLVRGD
VSPEDLLDKQGNGKAVLLMLITMVLCCSPVCEKQALFAICQSVKENGLEPHLVKKVLKKV
SDIFGYKSIEDFMTSHLDYLVMEWLKINDSGYSLSAFPYVLLNYTSLEEFYRSCYKVLVP
HLVIRSQFEDVKSLANKIEKDWRHVLADCFPKLLVNILPYFVYQSHGKSEVAEQREMASK
VYDRLKDENCLGKQQIDNLSHNNLPEIVVELLMTLHEPAGTTVEGGSHLSKYIRELDPAP
NPPHFPSYVIKATLDYISNCHKSKLKSIVEVLSKSPDSFQKILLALCKHASDTKNMYKKH
RVLVIYHLFVGLLLKEIKDSLGGAWAFVLRDVIYTLIHHINSRPIIVRDISMRSFSLCCD
LLHHVCHTAVKCCSDALETHLHVIVGTLIPLAMDQSQIQEQVLGLLKYLVIDNKDNESLY
QAIKSLDPFPEYPAFKDLRAAQQKIKYSKGSYSLLEEINHFLSVGVCDSLPLTRLEGLYD
LRKKLEQYKDQMKDLLKIFQEKPEDSVVVKLVVSLLQLSKMAVNHRGEKAVLEAVGSCLG
EIGPMDFSTTALQRAENALDSRAADLLEDRKLQWVFIMLIQINTALTDNCIDVRAAAVSC
LKNILATKSGNEFWEVYKSKADPMLIYLQPFRTSRKKFLVVPANDTEAPLERLDDTNLWI
PLGESHETWIKHLTSSILDSGGVKNEVLQLMKPLCEVKTDLCQTLLPYLIHDTLLHDSDE
SWRNLLSLHIQKFFTACCKFASSSRSTPNSDSEQETHNFRSLDKVSRRAMLAVVDYLRRQ
KRSVSGTVFDDSFWLDLNYLEVAMAAQSCAAHFTALLYAEIYADKINRDKQQERSSFKAA
KSLTFEEESQRTPITTLNEKSKEETGISLQDLLMDIYRSIGEPDSLYGCGGGRMLQPLAR
IRTYEHEAVWEKALVTYDLETSLSPSTRQAGIIEALQNFGLCHTLSMYLKGLERENTEWC
AELQEIRYQAAWRNMQWSHISSVKDEAGSPGYHESLYDALQSLRDKEFSAFHDSLKDARV
NEVEELCKGSLESVYSLYPTLCRLQLIGELENAGLLFSRSVTTQQLNDVYLKWQRQSQLL
KDSDFHFQEPIMALRTVILEILLEKESENTKRECIKDLLTKHLVELSRLARTAKNTQLPE
RAMFQIKQHNPNGNGVSEWQLEEAQVFWAKKEESLALNILKTMIKKLDADWFQVENDRHL
KLMYTECLRLCGTWLAETCLENPTVIMQKYLEKAVEIAASPSGDSSDELKKGKMKAFLSL
ARFSDNQYQRIENYMKSSEFENKQALLKKAKEEVGLIRERRVQTNKYTVKVQRELELDEG
AIQALTEDRKRFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSGVDRVNEMMKKNAQK
IPSYKFLPLMYQLAARMGTKMMGGLGFHKVLNNLMARISLDHPHHTLFIILALANAGKDE
LLTKPDAIRTNKLIKNAPKEISQLDVDRMEAASTIMNVVRKRRAHMVRDTEALCDAYITL
ANLDPSPWKSQRKGISIPADQPIIKLKNLEDVAVPTMEIKVDPTGQYENLVTISSFKQEF
RLAGGMNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTETRKRKL
NIRRYKVVPLSQRSGVLEWCSGTTPIGEFLVNAEEGAHKRYRPKDYSGYQCYKIMQDAQK
THAEEKYRTFMEVCENFQPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYILGLGD
RHVQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRC
CEKTMAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADMSSTLGTDPQE
PKRKASSDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRLFP
GWKPWV
NT seq 9201 nt   +upstreamnt  +downstreamnt
atgagtcttgcattacacaatttgcttgtttgttgtcgtcgccttgaaaatgagaaagct
gtggagcgaaggaaagaaattgaaaatttcaagcgacttctccgtgattctgaaacagtt
ctccagctggaccggaattctgattctaaacaagggaagcaactcaactgggatgctgtg
tttagtgtcttgcagaaatattttcagaaagagcttaaaaacctgcagctgacaaaacca
aatgcatctgcttcaacccaaactaccagacagaaaaagatacaagaagttggaagtttg
gtcaaatatttcatcagatgtgctaataaaagaggacccaggctgaaatgtcaggaactt
ctgatttatgtcatggaaattataagagatccaacaagttgtgctgcttatggttctgac
tgtagtagtatactcctaaaggatatcctctcagtaaggaaatactggtgtgagatatcc
cagcagcaatggtcagagttgctgaccctgtatgcccatttatacctcgaatcatctggg
aacattaatagagtcttagtggctaggataattcacacacttacgagagggtactgcttc
caaactgatgggttgagttccgatatgcttgtcttcttttctaaagcaacgcagtctgca
aggcaggagaagaacactgcaggcctggatcatattgttggagctatgaatatcttctgc
cacaaatttgctgacaactgtcgcatacggatttgcaaagtaggggaagaaattttgcct
acagtgctttacatatggactcagtatagaccaaaggattccctgaaagaatcaataatt
gagttatttcgtctccaagttcatattcatcatccaaagggtgcaaaaactcagggaaga
ggtgcatatgacttaacaaagtggcaaagcatcttacataacctgtatgatctgctgctg
aatgaaataaatctcatcagtagcagagggaagtattcttcagtctcacgtaatgttgct
gtaaaggaaaatttaattgagttaatggctgatatttgtcatcaggtttttacagaggat
accaaagtccttgaaattacccagtcatatgctgtttcacaaagagagtcctgtgagggc
acagtgccaaacaagcgcaggaggattgagcttggctggggggtcattcgagacaacgtg
caaagatcccagaaggattttgatgtcataccttggttacagattacaagtcagttaata
tccaagtatcccatgagtcttcctaacagtgagctgcctgccttgctcaatgtccttcat
cagttactgcctcagcagcgccgaggagaaaggaccccatacgtgctgaagtgtctcaca
gaggtagctttgtgtcaaaaccagaaaactgatttgaagagcaccctcaagctggagctc
cagagaacctgggcaaagatctggactctgaccattcgcagtgtaagccttcagcaaatt
gaagcggagagctttgggctgcttggagctatgattcaagggaaccttgttgtaacagat
aaagaactctggaaaatattttcaggacctgcatgcaaaccttcaagttctgctgtatgt
tgtttatctttagtgatgtctacctgctcagtgccagaaaatttggacataggaatggaa
cagaataattctgaaagaaatctgggttctgtgttaagggaggcaataatgaaatggctc
ctgtccagctgtttggaggaagaaatagaagaatgtgcagagttgcctcctgtgctctgc
agtgattttcctcatcttgtattacaaaaaattcttgtgagccttacaatgaagaactgc
agagctgccataatctttttcctaaatgaggctaaatgtgagcaacacgtgcaagggaaa
gaagaaaacaatttttctgatgttgaagagctgtacctgcagacaacatttgatgaaatg
gatattttcactaactttgcagtaaatgttacagataaaaatgtgactggttccagactt
gccatcaaccaaaatcttagggaaacactggagaactgccttttagcaatgtcggaaaag
cttttaagcagttgtggtcctaagtctaaggttgttgctgctgaacaccttgtccgatgc
gtcagtctcttggttggtgttctgggttgctattgctacaccggtatttttaaagaggag
gatgcctgtaagtcagccttgttccagaatgctaagtctctcattcattatgctggagaa
agcatttctcagtctaagaacaaactaaatgaagatacccagatcaacatgctgaggact
ttgatagtgcagtgtactaaatgtttgtgcaattgtaccaagagcagtgctaataagatg
ctgtctaatatattcctgcgtttgttaacatcaaaatttatgaatgatctcatagatatt
tgcaagaatctgatgacagttactggaaagccaaatgtattgggagaagtggatctcagg
aatgatcctgaggagagtataatggaagtagataactgggtatctgatgatctgtttgat
gatcattcagtgactgacatcagtgatacaaatgaatctggtgacatgcagagtgtaaca
ggtgctttgagcccgttagctgaagaacagttgacaaagcaggatttgcttctccttgaa
attgtgaggttcttgtgtatttgtgtgactacagtccgagttcagacagtgagcttccga
gcctctgatattcggaggaggctgttaatgctgactgaaggcagtgtctttgatagcact
aagccactgcatctgcacatgtacttgatcctgttgaaggagctcccgactgaagaacac
ctcttgcctgcagtcgatgttgatatgcttcttaagcctctttctactgtgtgttcttta
tatcgtcgagatcaagaagtttgtaaagtaatcctaaataatttgctccctatagcagta
gggttgacccagttggatgaacatgctgaagagacagggaatgccaaaggacagtttttg
acagttgttggagccttttggcatttatctcaaggagggaaatgcacagcatcagtaaga
gtggccctgttaaactgcatgaaaaccctgcttgaggttgatcctctttgcaagtgggcg
atccttaatgtgaaaaatgaagatctacctgtgagcgatgctttcccacatttccttgca
gacagtcaccatcaagttcgcattcttgctgcaaggtcaattaccagtttgtttcaagat
gtgaaacagagagattcttctggaatgtcaaaacctcttcccctgaagctccagcaaaag
gcttttgagaatgcatatctcagagttcaggaaggaatgagcaatctggtcagaggtgat
gtaagtcctgaagatcttttggacaaacagggtaatggaaaagcagttcttctgatgctt
ataaccatggttctgtgctgcagtccagtctgtgaaaagcaagctctgtttgctatttgc
cagtctgtgaaagagaatggattagaacctcaccttgtgaaaaaggttttgaaaaaagta
tctgacatttttggctataaaagtatagaagacttcatgacatcacatttagactacttg
gtgatggagtggctgaaaataaatgacagtggatatagcctgtctgcttttccttacgtt
cttctgaactatactagccttgaggagttctacaggtcttgttacaaagttctggttcca
cacctggtgattagaagtcagtttgaagatgtgaaatcacttgccaacaagattgaaaaa
gactggagacacgttctggcagactgttttccaaagttacttgtcaatatcctcccatac
tttgtctatcaaagccatggaaagagtgaagtagcagagcaaagagaaatggcttctaaa
gtctacgacaggcttaaggatgaaaactgcttaggaaaacagcaaattgacaatttatct
cataataacttgccagagattgtggttgaactgttgatgaccttacatgaaccagctggt
accacggtcgaaggagggtctcatctaagtaaatacataagggaactggatcctgctcct
aatcctcctcattttccatcttatgtgattaaggcaaccttggactatattagcaactgt
cataaaagcaaattaaaaagtattgtagaagttctttctaaaagccctgattcgttccag
aaaatccttctagctctttgtaagcatgcatcagatacaaaaaacatgtataagaaacac
agagttctcgtaatctatcacttgtttgttggtctgttacttaaagagatcaaggacagt
ttaggaggagcctgggcttttgtcctccgagatgtaatttacaccctgattcaccacatc
aatagcagacccatcatagtcagagacatatccatgcgcagcttttcactctgctgtgat
cttctgcatcatgtttgccacacagcagttaaatgttgcagcgatgctctggagacccac
cttcatgttattgtaggaaccctaatacctcttgccatggaccagtctcagattcaggaa
caggtcctaggcttgttgaagtatctggtgatagataataaggataatgaaagtctgtac
caagcaatcaaaagcttagatccttttcctgaatatccagcttttaaagatttgcgagca
gctcaacagaaaataaaatacagtaaaggatcatattctcttttggaggaaattaatcac
tttctctcagtcggggtttgtgattcactgcccttgacacggcttgaaggactgtatgat
ttacgcaaaaagttggaacaatataaagatcagatgaaggatctcctgaaaattttccag
gaaaagccagaagattctgtagtagtgaaattggtggtgagcttactgcagctgtccaag
atggcagttaaccatagaggagaaaaagcagtgctggaggctgttggaagttgcttggga
gaaataggtcccatggatttctccaccacagctctccagcgtgctgaaaatgcactggat
tctagagcagcagacttacttgaagatagaaaacttcagtgggtcttcataatgttaatt
caaataaacactgctttaacagataattgtattgatgttagagctgctgctgtttcctgt
ttgaaaaacatattagccaccaagtctggcaatgaattttgggaagtttataaaagtaaa
gctgatcccatgttaatctatctacagcctttcagaacatctaggaaaaagtttcttgta
gtacctgccaatgatacagaggctcctttagaaagattggatgacacaaacctgtggatt
cctctgggagaaagtcacgagacctggatcaagcaccttactagttcaatattggacagt
ggaggtgtgaaaaatgaagttctccagttaatgaagccactgtgtgaggtgaaaacagac
ttgtgtcaaactttgcttccatacctaattcatgatacccttcttcatgactcagatgaa
tcttggagaaatcttctgtcacttcatatccagaagttttttacagcctgttgcaaattt
gcctcatctagtagatctactccaaattctgattcagagcaagaaacccataattttaga
agtttggataaagtatctcgacgagccatgcttgctgttgttgattacttgagaagacaa
aagagatctgtttcaggtacagtttttgatgacagcttctggctagacctgaattatctg
gaggttgctatggcagcacagtcttgtgctgctcacttcacagccttgctctacgcagaa
atctacgcagacaagataaatagggataagcagcaagaaagatcttcttttaaagcagct
aagagtttgacatttgaagaggaaagtcaaagaacacctattactactttaaatgaaaaa
agtaaagaagaaactggcataagtttacaggaccttctcatggacatctatagaagcatt
ggagaacctgacagtctttatggctgtggtggaggaagaatgttacagccattagcacgg
ataagaacatatgagcatgaagcagtgtgggagaaagcccttgtaacatacgaccttgag
acaagcctctctccatctactcgccaggcaggaataatagaggctttgcagaattttggg
ctttgccacactctttccatgtacttaaaagggctggaacgtgaaaacactgagtggtgt
gcagaactccaggaaatacgctaccaagcagcatggaggaatatgcagtggagccacatc
tcttctgtcaaagatgaagcaggaagtccagggtaccatgaatcattgtatgatgccctt
cagtctttacgagataaggaattctctgctttccatgacagtcttaaagatgccagagtg
aatgaagtagaagagctgtgcaagggcagtcttgagtctgtttattccttatatccaacc
ctttgcagactacagctaattggagagttggaaaatgctggtctgctgttctccagatct
gttactactcaacaactgaatgacgtttatttgaaatggcagagacagtcccagcttctc
aaagacagtgacttccatttccaggaacctatcatggctctgcgcactgtaattttggaa
atcttgcttgaaaaggagagtgaaaataccaaaagagaatgtattaaagacctcctgacc
aaacatctagtggaactctctagactggcaagaactgctaaaaatacacagcttccagaa
agagctatgtttcagatcaaacagcacaatccaaatggaaatggagtttctgaatggcaa
ctagaagaagctcaggttttctgggctaaaaaggaagagagtcttgcactgaatatactt
aaaactatgattaaaaaattagatgcagattggtttcaggtcgagaatgatcgtcacctg
aaattgatgtatacagagtgcctgaggctctgcggtacctggttagcagaaacatgcttg
gaaaaccctacagtcatcatgcagaaatacttagaaaaggctgtggaaattgctgcaagc
cccagtggagacagcagtgatgagctgaagaaaggaaagatgaaggctttcctctccttg
gcgcgtttttctgataatcagtaccagcgaattgagaattacatgaaatcctcagagttt
gaaaataagcaggcactgctgaagaaggccaaggaggaggtcggtctcatcagggagcgc
agagttcagaccaacaaatacacagtgaaggttcagcgagaacttgagctggatgaaggt
gcaatacaagccctaactgaggatcgtaaacgcttcttgtgtaaagcagtggagaactac
atcagctgtttattgagtggagaagaacatgatatgtggatattccgactctgttcccta
tggcttgaaaattccggagttgatagagtcaacgaaatgatgaagaaaaatgcacagaag
atcccttcatacaagttcttgcctctgatgtaccagctggctgctcggatgggaacaaag
atgatgggtggtttaggatttcacaaagtcctgaataatctaatggctcgaatttcactg
gatcatccacatcatactctgtttataatattagctttggctaatgctggcaaagatgaa
ctcctcacaaaaccagatgcaataagaacaaataagttaattaaaaatgcaccaaaagag
atctcccagcttgacgtggacagaatggaagctgctagcactataatgaatgtcgtaagg
aaaagaagagctcatatggttagagacaccgaagcactgtgtgatgcttacatcacatta
gctaatttagatcctagtccatggaaatctcaaagaaaaggaataagtattccagctgac
cagccaattattaaactgaagaacttggaggatgttgctgttcctaccatggaaattaag
gtggatcccacaggacaatatgaaaatttggtcacaataagttctttcaagcaagaattt
cgtttagcaggaggcatgaatctgcctaaaataatagattgtgtaggatcagatggtaaa
gaaaggaggcagctggttaaggggcgtgatgacctgagacaagatgcagtcatgcaacaa
gttttccagatgtgcaatacattgctccagcaaaacactgaaacacgaaagaggaaatta
aatatccgaagatacaaggtggttcccctttcccagagaagtggagtcctggagtggtgc
tcaggaacaactcccattggggagttccttgtgaatgccgaagaaggagctcacaagagg
tacaggccaaaggattactctggttatcagtgttataaaataatgcaggatgcccaaaag
acacatgctgaagagaaatacagaacgttcatggaagtctgtgagaattttcagcctgtg
ttccggtatttctgcatggagaaattcctggatccagcagtgtggtttgaaaaacgattg
gcatacactcgcagtgtggctacatcttctatagttggctacattcttggacttggagac
agacatgttcagaatatcttgatagatgaacaaacagcagaactagtgcatatagatctg
ggggttgcttttgagcaaggcaaaatccttcccacaccagagactgttccatttagatta
accagggacattgtggatggaatgggtatcactggcgtggagggagtcttcagaagatgc
tgtgagaaaacaatggctgttatgagaaattctcaagaagctttgttgactattgtagag
gtgctgctctatgatccgcttttcgactggactatgaaccccttgaaagctttgtacttg
cagcagaggccagaggatgaggctgacatgagctctacacttggtactgatccacaagaa
cctaaaagaaaagccagcagtgacgaccagagttttaacaaggtggctgagcgtgttctg
atgagacttcaggagaagctgaaaggtgttgaggagggaacagtgctcagtgtgggaggg
caggtgaacctccttatacaacaggccatggaccctaaaaatctgagccgactctttcct
gggtggaaaccctgggtgtga

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