KEGG   Corvus cornix (hooded crow): 104694179
Entry
104694179         CDS       T03546                                 
Symbol
SIM1
Name
(RefSeq) single-minded homolog 1
  KO
K09100  single-minded
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccw03000]
    104694179 (SIM1)
Transcription factors [BR:ccw03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    104694179 (SIM1)
SSDB
Motif
Pfam: SIM_C PAS_3 PAS_11 PAS HLH PAS_9 PAS_4 Per3-like_PAS-A
Other DBs
NCBI-GeneID: 104694179
NCBI-ProteinID: XP_039425923
Position
3:73425432..73477555
AA seq 766 aa
MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQVTATKPAFSYANST
PTITDNRKGSKSRLSSTKSKSRTSPYPQYSGFHTERSESDHESQWGGSPLTDTASPQLLE
PADRPSSQHHDASCAYRQYSDRSALCYGFALDHSRVTDDRHFHTQACEGGRCEAGRYFLG
TPQPGRESWWGSRSALPLTKSSPESREAYENSMPHITSVHRIHGRGHWDEDSVVSSPDPG
SASESGDRYRTEQYQNSPHEPSKIETLIRATQQMIKEEENRLQLRKTTPDPLVSINGTGK
KHAICFANYPQQQVAADVCRVPTVANTPPCEHIQQRDGKIMSPHENDYDNSPTTLSRISS
PSSDRISKSSLVLAKDYLHSDMSPHQNQGDHPAVSPNYYSSHRQYFDKHAYTLTGYALEH
LYDTETIRNYSLGCNGSHFDVTSHLRMQQDPAQGHKGTSVIITNGS
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgaaagagaagtccaaaaatgctgcccggactagacgggagaaagaaaacagtgaattt
tatgaactggctaaattactacccctgccctccgctatcacctctcagctggacaaagca
tccataatcagactcaccaccagctatttaaaaatgagagtggtttttccagaaggactt
ggagaagcctggggccactccagccgaaccagcccactggataatgttggacgggaactg
ggatcccatcttttgcagacgttggacggtttcatatttgtcgtggctccggatggcaag
atcatgtacatctcggagactgcctcggtgcacctgggcttgtcacaggtagagctgacc
ggcaacagcatttacgagtacatccaccccgccgaccatgacgagatgacggcggtgctg
acggcgcatcagccttaccactcgcacttcgtgcaggagtacgagatcgagagatccttt
ttcctgaggatgaagtgcgtcctggccaagaggaacgcgggcctgacctgcgggggctac
aaggtcattcactgcagcgggtacctgaagatccgccagtacagcctggacatgtccccc
ttcgacggctgctaccaaaacgttggcttggtggccgtgggccactcgctgccacccagc
gccgtgacggagatcaaactccacagcaatatgttcatgtttcgggccagcctagacatg
aagctcatattcttagattccagggtagctgagctaacaggttacgagccccaggacttg
atagagaagaccctttaccaccacgtccatggctgtgacacctttcacctgcgttgtgca
catcacctgttgctggtgaaagggcaagtgaccaccaagtactaccgcttcttggccaag
cacggcggctgggtgtgggtgcagagctacgctaccatcgtgcacaacagccgctcctcc
cgcccgcactgcatcgtcagcgtcaactacgtgctcacggatactgaatataaaggacta
cagctctccctggatcaggtcactgctaccaagccggcattctcatacgcaaattcaact
ccgaccataacggataatagaaagggaagcaaatctcgcctctcgagcacaaagtcaaaa
tcaaggacatcaccatacccacagtattctggatttcacactgagagatccgagtctgac
cacgagagccagtggggtgggagcccactgaccgatacggcttctccccagctcctggag
cctgcggacagaccgagctcccagcaccacgacgcctcctgtgcctacagacagtactca
gaccgcagcgcgctctgctacggttttgcgctcgaccactccagggtgactgatgacagg
catttccacactcaggcctgcgagggaggcagatgcgaagctggccggtatttccttggc
acgccgcagccggggagggagagctggtggggctctcgttcagcattgcctctgactaag
tcatcccctgagagcagagaagcgtatgagaacagtatgccccacataacgtcagtgcac
aggattcatggaagaggacactgggatgaggacagtgtcgttagctcacctgatcctggc
tctgccagtgagtcaggtgaccgataccgtactgagcagtatcagaacagtccacatgag
cccagcaaaattgaaactctaataagagccacccagcaaatgattaaagaagaagaaaac
aggctacagctgcggaagaccactcctgacccactggtctccattaacggcacggggaag
aagcacgctatctgttttgcaaactaccctcagcagcaggtggcagcggacgtctgccgc
gtcccaacggttgccaacactcccccctgtgaacacatccagcagcgagatggaaagatt
atgagcccacatgaaaatgactatgacaacagccccacaacactgtctaggataagcagc
cccagttctgatcgaatatcaaaatctagtttggtacttgctaaagactacctgcattca
gatatgtcccctcatcaaaaccaaggagaccacccagcagtctctccaaattattacagc
tcccacaggcagtactttgataagcatgcttacacactaactgggtatgctctggagcat
ctatatgacactgaaacaattagaaactattcactaggctgtaatggatcccactttgat
gtgacttctcacttaaggatgcagcaagatccggcacaaggacacaagggaacatctgtt
ataataaccaatggaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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