KEGG   Corvus cornix (hooded crow): 104694357
Entry
104694357         CDS       T03546                                 
Symbol
UTP18
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 18 homolog
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104694357 (UTP18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccw03009]
    104694357 (UTP18)
Ribosome biogenesis [BR:ccw03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104694357 (UTP18)
SSDB
Motif
Pfam: WD40 NBCH_WD40 DEK_C
Other DBs
NCBI-GeneID: 104694357
NCBI-ProteinID: XP_039418514
Position
18:6234696..6243716
AA seq 590 aa
MSASECRCARDVPGRGRGGGASLSRAGAGPGGGHVTAHVFRFRVWXRAPGAAKAAKAAGM
KAAKKAAKLPKAAKMTKPKRMVKRRPAVADQAAAEAARRARHLKALSCVSGAERELEELV
FGDSLNVEEDELLRRLAGPRRVTAAEGKGLQEESSDSEVENEAKGDLLPKKPAWVDEDDE
AEENVDMTHKYRKDFMKSDAETTLTKKKLKKRLEEQFQQAMGGVPAWADLENRKKSKRTL
SDSDSDEDDDLLCRTGNYITSSESLPRGILKMSTCLPANQERFANGKLVTVQFHPSAQVV
MTAGHDRSVSLFQVDGIRNPKIQSIYLESFPIYKARFSMDGEQVIATGTHHSMFFVYDMM
AGSIIPIPKVRGVEEKFLRNFELSPDGSFMLLIGTSGYLHLLSMKTKELISTMKVNGRCT
ASAFTPDSSKIYSYSKEGEVFIWDVRSRKCLHKFEDEGSLEGKCIAVSKNNQYVACGSSS
GVVNLYTTDTCLKENRPKPVKAIMNLVTSATCVTFNPTTEILAVASRDTDEAVKLVHLPS
YTVFSNFPVFRRKQIYLTQSMDFSPRSGYFSVANNKGKALLFRLKHYSSF
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtccgccagcgagtgccggtgcgcgcgggatgtcccggggcgggggcggggcggaggc
gcgagcctatcgcgggcgggggcggggccgggcgggggtcacgtgaccgcacacgtgttc
cggttccgggtctggntgcgggctccgggcgcggcgaaagcggcgaaagcggcaggaatg
aaggcggcgaagaaagcggcgaaattgcccaaagcggccaaaatgacgaaaccgaagcgg
atggtgaagcggcgcccggctgtggcggatcaggcagcggccgaggcggcgcggcgcgcc
cgccacctgaaggcgctgagctgcgtgtcgggcgccgagcgggagctggaggagctggta
ttcggtgacagcctcaacgtggaggaggacgagctgctgcggcgcctggccgggccccgg
cgggttactgctgcagagggtaaaggcctccaggaagagtccagcgattcggaggtggaa
aatgaagcgaaaggtgacttactgcccaaaaagccagcctgggtggatgaggatgatgaa
gctgaggaaaatgttgatatgacccataagtacaggaaagatttcatgaaaagtgatgct
gagacaacgcttactaagaaaaagctaaagaaaagacttgaggaacagtttcagcaagcc
atgggaggagttcctgcctgggctgatctagaaaacaggaagaaatccaaaaggactttg
agtgatagtgacagtgatgaagatgatgatctgctatgcaggactggcaattacatcacg
agctcggagtctctgccaagagggattttaaagatgagcacctgccttcctgcaaaccag
gaacgttttgccaatggaaaactggtgacagtgcagtttcatccttcagctcaagtggtg
atgacagctgggcatgatcgctctgtgtccctcttccaggtggacggtataaggaaccca
aaaatacagagcatctatttagagagttttccaatttataaggctcgtttcagtatggat
ggagaacaagttatagccactggcactcaccacagtatgttctttgtgtatgacatgatg
gctgggagtatcatccctatcccaaaagtacgaggtgtggaggaaaaatttctcagaaac
ttcgagctctctccagatggatcatttatgctgctaattggaacttcaggttaccttcac
ttgctgtccatgaagacaaaagaactgatcagcactatgaaggtgaatggaaggtgcact
gcctctgctttcaccccagacagcagtaaaatatacagctattcaaaggaaggtgaagtt
ttcatttgggatgtgagaagcagaaaatgtctacacaaatttgaagatgaaggttctttg
gaaggaaagtgcattgctgtttcaaaaaataaccagtatgtggcatgtggttcatcttct
ggagttgtaaatttatacactactgatacttgcctcaaagaaaaccgtcctaaaccagtt
aaagccataatgaaccttgttacttctgccacctgtgtgaccttcaatcccaccactgag
attttggcagtggcttcccgtgacactgatgaggctgtcaaattggtgcaccttccttca
tacactgtattctcaaacttcccagtgttcaggagaaaacagatttatcttactcaatct
atggacttctctcccagaagtggatatttctctgtagcaaataacaaaggcaaagctttg
ttatttaggctgaaacattattcatccttctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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