KEGG   Corvus cornix (hooded crow): 104694434
Entry
104694434         CDS       T03546                                 
Symbol
LAMP2
Name
(RefSeq) LOW QUALITY PROTEIN: lysosome-associated membrane glycoprotein 2
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04140  Autophagy - animal
ccw04142  Lysosome
ccw04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104694434 (LAMP2)
   04142 Lysosome
    104694434 (LAMP2)
   04140 Autophagy - animal
    104694434 (LAMP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccw04131]
    104694434 (LAMP2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccw04147]
    104694434 (LAMP2)
   04090 CD molecules [BR:ccw04090]
    104694434 (LAMP2)
Membrane trafficking [BR:ccw04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    104694434 (LAMP2)
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    104694434 (LAMP2)
Exosome [BR:ccw04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   104694434 (LAMP2)
CD molecules [BR:ccw04090]
 Proteins
  104694434 (LAMP2)
SSDB
Motif
Pfam: Lamp Lamp2_2nd Adeno_E3_CR2 DUF4129
Other DBs
NCBI-GeneID: 104694434
NCBI-ProteinID: XP_039428249
Position
4A:complement(9687282..9701411)
AA seq 481 aa
MESSGGAERRLAARGRPRPAPHMTAGEVFVAPARRPPVSXTAGSGSSTTAMGPSRSAASS
CRRFLLPLLLLGVSGFFQSYAVEVDIKDASNATCLYADWMMRFLITYESNNGDYKTTTLN
LSSSVTHNGSVCGNDTQAALVAVQFGEGHSWSINITKNNETYQGDFITLTYNTNDTAVFP
DAKRKGPVTVLVKDPLHPVQLNTVFVCHNSYFIEAENITQIFWNVTMQAFVQNGTVSKKE
SRCPADTPTSAPTVPPTIANVTTAFTTTLAPAPTTAPKPVENPDTGNYSLKSGNKTCFLA
TVGLQLNVSQDKPLLININPKTTVADGACGNTTATLKLNDGNSTLIGFTFAVKNTSASVQ
KFYLREVNVTLLSRLNGSVISSADNSNFSKWDAFLGSSYMCRKEQTLQINEDVQVHTFNL
WIQPFLVEANKFATAEECIADSDLNFLIPIAVGVALGFLIILVFISYIIGRRKSRTGYQS
V
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggaatcgagcggcggcgctgagcggcgattggcggcgcgcgggcggccccgccctgcc
cctcacatgaccgctggcgaggtttttgtcgcgcccgctcgccgtcctccggtgtccncc
accgccggcagcggcagcagcaccaccgccatgggcccaagccgctccgccgcttcctcg
tgccgccgcttcctcctgccgctactgctgctcggcgtctccggttttttccagtcctat
gcagtggaagtagatataaaggatgcctctaatgctacttgcctgtatgcagattggatg
atgaggttcttgataacatatgaatcaaacaatggtgattataaaaccacaaccctgaat
ttgtcatcaagtgtgacacacaatggaagcgtctgtggcaatgacacacaagctgcactt
gtggcagtgcagtttggagaaggtcattcttggagcattaacatcacaaaaaacaatgaa
acttaccagggagacttcatcacactgacctacaacaccaatgacacagctgtatttcct
gatgctaaaagaaaaggaccagttactgttcttgtgaaggatcctttgcatccagttcaa
ctgaacactgtctttgtgtgtcataattcctactttattgaagcagaaaatataacgcag
attttctggaatgttactatgcaggcttttgttcagaatggcacagtcagtaaaaaagag
tctagatgtcctgctgatacacctacttctgcacctactgttccacctactattgccaac
gtaactactgcatttaccactactttggctcctgctccaacaactgctcccaaacccgtg
gagaatccagacacaggaaactattctcttaaaagtggaaataaaacttgtttcctggct
actgtggggctgcaactgaatgtttcccaagacaagcctctcctgatcaacatcaatcca
aagacaactgtcgcagatggtgcctgtggtaacacaacagctactctgaaactgaatgat
ggaaatagcacactgattggtttcacatttgctgttaaaaatacaagtgcaagtgtacaa
aagttttatctgagagaggtgaatgttacgctgcttagccgtctgaatggttctgtcatt
tcaagtgcagataacagcaatttcagcaagtgggatgctttccttggtagctcttacatg
tgccgaaaagagcaaactcttcagattaatgaagatgttcaagtacatacttttaatcta
tggattcagccattccttgtggaggcaaataagtttgctacagctgaagaatgcattgct
gattctgacctgaactttcttattcccatcgcagtgggtgtggcacttggattccttatc
attcttgtctttatatcttacatcattggaagaagaaaaagtcgtactggctatcagtct
gtataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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