KEGG   Corvus cornix (hooded crow): 104698113
Entry
104698113         CDS       T03546                                 
Symbol
RNF169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
  KO
K20805  E3 ubiquitin-protein ligase RNF169 [EC:2.3.2.31]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccw04121]
    104698113 (RNF169)
   03400 DNA repair and recombination proteins [BR:ccw03400]
    104698113 (RNF169)
Enzymes [BR:ccw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     104698113 (RNF169)
Ubiquitin system [BR:ccw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    104698113 (RNF169)
DNA repair and recombination proteins [BR:ccw03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     104698113 (RNF169)
SSDB
Motif
Pfam: zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_4 Prok-RING_4 zf-RING_5 zf-RING_UBOX
Other DBs
NCBI-GeneID: 104698113
NCBI-ProteinID: XP_039420195
Position
1:763158..784371
AA seq 671 aa
MRGGRGRRGPSKCGKMAAAAAGAGGRAAVRGRRRRGRSAAEEEQDAVVLSVAECPVCRQA
LVEAVTPPCRHSLCLACFQRCLQGPGLCCPLCRSRLSTRARRQQAEPAATTAAGAAGGEQ
RPPDQDFIFRAPIKLSKTGELREEYESQLRKLREEKLQEEKTSEDLINKFILDDMDVGKR
KMEEQQKKDESVVLKGNQECFPERLSDSENEEPFQGKQTHRSAFVSKTSAYSFAFLSGNL
TTKVERSRSCNDTIQERSKSRQRSAPATKTKVLPITGASTPLLGVLSSTQNNRCLSAPDL
TAEKRLVLNAVSSLSALHRPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLS
PLIIKSTPRNLNRSLQKPTTYEASPRILKKWEQIFQERQIKKTLSKATLTSLASEPGEDT
VVPDITNSSSCTKEQPQVQDDHLPPDTTGEPRADLDFFPSVSEMKLGRGSEKSRGSQALT
TDDGADEPDVRSNVTALNTRVSEVPDLKVNTFMDKSCLSLGPKMLSRRLMGVSASLPDTS
ALGVPIKPSGKKQLKYLNNSELINVQNSTCNSVENIIGEQPPLLRRGRKRRCKTKHLEHN
GSVKRLRHVAGEVGLPPEVRDVEQKLQQEEEDRRLALHLQRIFDSENRTVDRRKVRVDRY
LLRSKSTLGAK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgcggggtgggcgtggccgccgcggcccttcaaagtgtgggaagatggcggcggcggcg
gcgggcgccggcggccgggccgcggtgcgggggcggcggcggcggggccggtccgcggcc
gaggaggagcaggacgcggtggtgctgtcggtggctgagtgcccggtgtgccggcaggcg
ctggtggaggcggtgacgccgccctgccgccactcgctctgcctcgcctgcttccagcgc
tgcctgcagggcccgggcctctgctgcccgctgtgccgcagccgcctctccacacgggcc
cggcggcagcaggccgagcccgcagccaccacggccgccggagcagcaggcggggagcag
cggccgccggaccaagactttatattcagagcacccattaaattaagcaaaacaggggaa
cttcgagaagaatatgaaagccagctaaggaagctgagagaagagaaactacaagaagaa
aagacatccgaggatctgattaacaagttcattctagatgacatggatgtagggaaaaga
aaaatggaggaacagcagaaaaaagatgaatctgtagtgctgaaagggaaccaagagtgt
tttcctgaacgtctctcggattccgagaatgaagaaccattccagggcaagcaaacacat
cggtcagcttttgtttccaagaccagtgcctactcctttgccttcctttcagggaattta
accaccaaggtggaaaggagtcggagctgcaatgacaccattcaggagagatccaagagc
aggcagagatcagccccagccaccaaaacaaaggtgctgcccatcaccggcgcgtcgacg
ccgctgctcggggtgctgtcgtccacgcagaacaaccgctgcctgtccgccccggacctg
acggccgagaagcgcctggtcctcaacgccgtgtcctccctgtcggccctgcacaggccc
gagcgatccatcagccccgagagcaatgacagcatctcggaggagctcaaccacttcaag
cccatcgtctgctccccgtgcactcccccaaagaggcttcccgatggcagagtcctgagc
cccctcatcatcaaatccacccccagaaacctgaaccgcagcctgcagaagccaaccacc
tatgaggccagtcctagaatactgaaaaaatgggagcagatatttcaggagcgtcagatc
aaaaagactctctctaaagcgacccttacgtccttggcttcggagcctggggaagacacc
gtggttcctgacatcaccaactccagcagttgcactaaagagcagccacaagtgcaggat
gatcaccttccacctgacactacaggagagcctcgagctgacctggatttcttcccttct
gtcagtgaaatgaagctgggaagagggagtgagaagagcagaggttcacaggccttaacc
acagatgacggtgctgatgaaccagatgtgagatcaaacgtaaccgccctaaacacacga
gtgtctgaagtccctgacctaaaagtgaatacattcatggacaaatcctgtcttagtcta
ggcccaaaaatgctgagcagaagactcatgggtgtcagcgcctcactgcctgacaccagc
gcgctcggagtccccatcaagccgtcggggaaaaagcagctgaaatacctgaacaacagt
gagttgatcaacgtacagaacagcacttgcaattctgtggagaacatcatcggggagcag
cccccgctgctgcggcggggccggaagagacgctgcaaaacaaagcacttggagcacaac
ggctccgtcaaaagactgaggcacgtggcaggggaggtgggcctgcctccagaggttagg
gacgtggagcagaagctccagcaagaggaggaggacaggaggttggccctgcacctgcag
cggattttcgacagcgagaacaggacagtggataggcggaaagtccgcgtggatcggtat
ctgctgcggtccaagagcactctgggtgccaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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