KEGG   Corvus cornix (hooded crow): 120412199
Entry
120412199         CDS       T03546                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 5C-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccw01009]
    120412199
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccw03036]
    120412199
Enzymes [BR:ccw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     120412199
Protein phosphatases and associated proteins [BR:ccw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120412199
Chromosome and associated proteins [BR:ccw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120412199
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD MmeI_C
Other DBs
NCBI-GeneID: 120412199
NCBI-ProteinID: XP_039428469
Position
Unknown
AA seq 1535 aa
MRGRGGTRQRARGAAPGEERSPRKPPEERGARGGDRPGPEDKARRPLGGPRGGAAPEQRG
DWGSPWLPAEPEPPEDFLPPPECPVFEPSWAEFSDPLGYIAKIRPIAEKSGICKIRPPAD
WQPPFAVEVDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILD
LYSLSKVVMEEGGYEAICKDRRWARVAQRLSYPSGKNIGSLLRAHYERIIYPYEMYQSGA
NLVQCHTRPFESEEKDREYKPHSIPLRQSVQPSKFNSYGRRAKRLQQEPEPTEEDIEKXP
ELKKLQIYGAGPKMLGLGLVAKDKTLRKKDKEGPECPPTVVVKEEPAGEPRGSPGSPGAR
DGREELRHSPEPCTKMTMRLRRSHSNSQFVDSYICRICSRGDEDDKLLLCDGCDDNYHIF
CLLPPLPEIPKGIWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADAFKADYFNMP
VHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVRDGKRRLSPEEEEYAGS
GWNLNVMPVLQQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPK
TWYGVPSFAAEHLEEVMKKLTPELFESQPDLLHQLVTLMNPNTLMAHGVPVVRTNQCAGE
FVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA
ASPEKLDLNLAAAVHKEMFVLVQEERKLRKALLEKGITEAEREAFELLPDDERQCDKCKT
TCFLSALACYDCPQGLVCLYHMDDLCKCPRSKQYLRYRYTLDELPAMLHKLKVRAESFDT
WANKVRIALEVEDGRKRTLEELRALESEARERKFPENELLHRLKGCLGQAERCVSEALGL
ISSQETGVPAPALTVEELRAFLEQMNQLPCVMHQIGDVQALLERVEAFQAEARAALDVPP
PAPGTLQELLERGARLGVEVPEGRRLERQLAQAAWLEEVTATLRSPRARVPLPVMRGLIQ
AGRTVAXSPAVDVAMAELQELLTIAQRWEEKAQMCLEARQKHPPATLAAIIKEAENIPAL
LPNIQALKEALAKARAWIADVEEIQNGDHYPCLDDLEGLVAVGRDLPVRLEELRQLEVQV
GTAHSWRDKASRTFLKKNSCYTLLEVLCPCADAGSDSSKRLKWRQEPGLYRLDAESLGLS
AQDLRDPGAVIVAFKEGEQKEKEGMLRLRHANAQKAAPPLPGPGPPSCVCGQPAGPGMLQ
CQLCRDWFHGSCVAWPRLGAQKPSPAWWEWDAKFLCPLCQRSRRPRLETILALLVALQKL
PVRLPEGEALQCLTERAITWQDRARQLLASPDVAGPLERLAALRHRLHGDSDGALREASR
NEQTKVSVENGDAPSPEKNGPLPSELEALSAALPRLQGPVLELSEGTRRPLEELMMEGDL
LEVTLDEAQSIWRLLQAPRPPPLALFRLLLELEQAERRGARARGRDPEKRRKRRAERGDL
PPLAKEELEPKRSRGPEGGDPRDSPTPGPQAPGDS
NT seq 4608 nt   +upstreamnt  +downstreamnt
atgcgcgggcggggggggacccggcaaagggcccggggggcggccccgggcgaggagcgg
agcccccgcaagccccccgaggagcgcggggctcgcggcggggatcggcccggccccgag
gacaaggcccggcggcccctcgggggtccccgcggcggggccgccccggagcagcgcggg
gattgggggtcgccgtggctgccggccgagccggagccccccgaggactttctgcccccc
ccggagtgccccgtgttcgagcccagctgggccgagttcagcgaccccctgggctacatc
gccaagatccgcccgatcgccgagaaaagcggcatctgcaagatccgaccccccgccgac
tggcagcccccgtttgctgtcgaggtcgacaacttcaggttcactccccgcatccagcgg
ctcaatgagctggaggcgcagacccgggtgaagctgaactacctggaccagatcgccaaa
ttttgggagatccagggctcctccctcaagatccccaacgtggagcggcgcatcctcgac
ctctacagcctcagcaaggtggtgatggaggaggggggctacgaggccatctgcaaggac
cggcggtgggcgcgggtggcccagcgcctgtcgtacccgtcgggcaagaacatcggctcg
ctgctgcgggcgcactacgagcgcatcatctacccctacgagatgtaccagtccggggcc
aacctggtgcagtgccacacgcggcccttcgagagcgaggagaaagaccgggagtacaaa
ccccacagcatccccctgcgccagtccgtgcagccctccaagttcaacagctacggccgg
cgcgccaagcgcctgcagcaggagcccgagcccacagaggaggacatcgagaagnaaccc
gagctgaagaagctgcagatttacggggccggtcccaaaatgttggggctggggctggtg
gccaaggataagaccctgcggaagaaagacaaggagggccccgagtgtccccccacggtg
gtggtgaaggaggagccggcgggggagccccgggggtccccggggtctccgggggcgcgg
gacgggcgggaggagctgcgccacagccccgagccctgcaccaagatgacgatgaggctg
cgccgcagccacagcaacagccagttcgtggattcctacatctgccggatctgctcgcgg
ggcgacgaggacgacaagctgctgctgtgcgacggctgcgacgacaactaccacatcttc
tgcctgctgccccccctgcccgagatccccaagggcatctggcgctgccccaaatgcgtc
atggcggagtgcaagcggcccccggaggcgtttggcttcgagcaggcgacgcgggagtac
accctgcagagcttcggcgagatggccgacgccttcaaggccgactacttcaacatgccc
gtccacatggtgcccacggagctggtggagaaggagttctggcgcctggtgaacagcatc
gaggaggacgtgaccgtggagtacggggccgacatccactccaaggagtttggctccggc
ttccccgtgcgcgacggaaaacggcgcctgtcccccgaggaggaggagtacgcgggcagc
ggctggaacctgaacgtgatgccggtgctgcagcagtcggtgctgtgccacatcaacgcc
gacatctcgggcatgaaggtgccctggctctacgtgggcatggtgttctcggccttctgc
tggcacatcgaggaccactggagctactccatcaactacctccactggggcgagcccaag
acgtggtacggggtcccgtcgttcgcggccgagcacctggaggaggtgatgaagaagctg
acgccggagctgttcgagagccagcccgacctcttgcaccagctcgtcaccctcatgaac
cccaacacgctcatggcccacggcgtccccgtggtccggaccaaccaatgcgccggcgag
ttcgtcatcaccttcccccgcgcctaccacagcggcttcaaccagggctacaacttcgcc
gaggccgtcaacttctgcacggccgactggctccctgcaggcaggcagtgcatcgagcac
taccggcgcctgcgccgctactgcgtcttctcgcacgaggagctcatctgcaagatggcc
gcgagccccgagaagctggacctgaacctggcggccgccgtgcacaaggagatgttcgtg
ctcgtgcaggaggagcgcaagctgcgcaaggccctgctggagaagggcatcacggaggcg
gagcgtgaggccttcgagctgctgccggacgatgagcgccagtgtgacaagtgcaagacc
acgtgtttcctgtcagccctggcctgctacgactgtccccagggcctcgtctgcctctac
cacatggacgacctctgcaagtgcccccgcagcaagcagtacctcaggtaccgctacacc
ctggacgagctgccggccatgctgcacaagctcaaggtgcgcgccgagtccttcgacacc
tgggccaacaaggtgcgcatcgccctcgaggtggaggacggccgcaagcgcacgctggag
gagctgcgggcgctggagtcggaggcgcgggagcgcaagttccctgagaacgagctgctg
caccggctcaagggctgcctgggccaggccgagcgctgcgtgtccgaggccctggggctc
atcagctcccaggagaccggggtccctgcgccggcgctgacggtggaggagctgcgggct
ttcctggagcagatgaaccaactgccctgtgtcatgcaccagatcggggatgtgcaggcg
ctgctggagcgggtggaggcgttccaggcggaggcgcgggcggctctggacgtgcccccc
ccggcccccgggacgctgcaggagctgctggagcggggggcccggctgggcgtggaggtg
cccgagggccggcggctggagcggcagctggcccaggccgcgtggctggaggaggtgacg
gccaccctgcgctccccccgcgcccgcgtgcccctgcccgtcatgcgtggcctcatccag
gccggccgcaccgtggccnccagccccgccgtggacgtggccatggccgagctgcaggag
ctgctgaccattgcccagcgctgggaggagaaggcccagatgtgcctcgaggccaggcag
aagcaccccccggccacgctggctgccatcatcaaggaggccgagaacatcccagcgctg
ctgcccaacatccaggccctgaaggaggccctggccaaggcccgcgcctggatcgccgat
gtcgaggagatccagaacggtgaccactacccgtgcctggatgacctggaggggctggtg
gccgtgggccgggacctgccggtgcggctggaggagctgcggcagctcgaggtgcaggtg
ggcaccgcgcactcctggcgggacaaggcctcccgcaccttcctcaagaagaactcctgc
tacaccctgctcgaggtgctgtgtccctgcgccgatgccggctccgacagcagcaagagg
ctcaagtggcggcaggagccggggctgtaccggctggacgccgagagcttggggctgtcg
gcgcaggacctgcgggaccccggcgctgtgatcgtggcgttcaaggagggtgagcagaag
gagaaggaggggatgctgcggctccgccacgccaacgcccagaaggccgcgccgccgctg
ccgggcccggggccgccgtcctgcgtgtgcgggcagccggcggggccgggcatgctgcag
tgccagctctgccgggactggttccacggctcctgcgtggcctggccccgcctgggtgcc
cagaagccgtcgccggcctggtgggagtgggacgccaagttcctgtgcccgctgtgccag
cgctcgcggcggccgcgcctcgagaccatcctggcgctgctggtggccctgcagaagctg
ccggtgcggctgcccgagggcgaggccctgcagtgcctcaccgagcgggccatcacctgg
caggaccgcgcgcgccagctcctggcgtcccctgatgtggccgggcccctggagcgcctg
gcggccctgcggcaccggctgcacggggacagcgacggcgccctgcgcgaggccagccgc
aacgagcagaccaaggtgtcggtggagaacggggatgcccccagcccggagaagaacggg
cccctgccctcagagctggaggcgctgagcgcggcgctgccgcggctgcaggggccggtg
ctggagttgtccgaggggacgcggcggccgctggaggagctgatgatggagggggacctg
ctggaggtgacgctggacgaggcccagagcatctggcggctgctgcaggccccgcgcccg
cccccgctggccctgttccgcctgctgctcgagctggagcaggcggagcgtcggggggct
cgcgcccgcggccgggaccccgaaaagcgccggaagcgccgggcagagcggggggacctc
ccccccctggccaaggaggagctggagccaaagaggagtcgggggcccgaggggggcgac
ccccgggatagccccacacccggcccccaggccccgggggactcgtga

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