KEGG   Corallococcus coralloides: COCOR_00913
Entry
COCOR_00913       CDS       T01780                                 
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
ccx  Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccx03400]
    COCOR_00913 (sbcC)
DNA repair and recombination proteins [BR:ccx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     COCOR_00913 (sbcC)
    Archaeal homologous recombinant proteins
     COCOR_00913 (sbcC)
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_21 nSTAND3
Other DBs
NCBI-ProteinID: AFE10305
UniProt: H8MK81
Position
1084777..1088643
AA seq 1288 aa
MKILAIRGSNLTSFAGDFALELDQAPLDRLGLFAISGATGAGKSTLLDALCLALFDRTPR
LGGPSKVLVGRADEDEEARLSAYDVRGMLRRGAGKGHAEVDFLGKDGRRYRARWNVWRAR
ERAEGRFRPQELSLTDVASGQLFGRTKGEVLHAIQERLGLSFDQFRRSALLAQGEFAAFL
RADANERAELLERMTGTEVYSRLSIAAHEKNAKEQEELKRLSLGLAAIALMSDADRESVR
AQLGEEEAARVREETRSREAEAARSWYAQRAEFVGQEQQAESAVARAESEREAAAPREAL
LESVRAAEGFRAVVSAVEAAEQGCVRAEAEQLERASQAEAALAAAAAQRQVRMQAEAARA
AALEAEASVRPALEEAATLDTRRAEAEREAREAAELAKQAKAAEASARDALGLVQAAEAK
AQVLVDAAEAWRTSHASWESLATEWPRWQRELERFAGALKEEQAAGADVDRLGTDADRLG
NEAQARREEHQGAVESEAQAQALATHAEAALGEDGGAARRALREALLARQEVLGALTLAG
EGARAEGSAEGDAAAEVKTHREVSQRAAAEAKDAAAARATQEAMLHEARRAQSRAEATQG
LASHRAALHEGEPCPLCGALEHPYAREASALEGLVAEAAARVLELESARDAAAKQESAAS
VRQATADTAATQAEARRDTAARKRTAHRDAWRAARERWTRAALPGEDTATLADAKASSRG
SKEHAAQDASAAASPPEDAEATTAQAWIRAAQEDVRARLATLRDEEASAEARASAAREAR
ALLETRRTRREGAAEALRKAEDAWSRAAQSHRDALLRRDTAREARERALTEVSPPFASEE
VTWKDKLAADSARFQSRCLERVTKWREKLAELETSRKRLEEQQGLRAREEVRLQSRHEDA
ETAAHRASLKDAAFQDASRARARLLQGRPTQEVRAEVQARIDAAQSTYERAREDSEALQQ
AEKVATARAEDAVRLRTEAALALERAQAVLSERLAGHGSTLEQLKALLSRGAAWCDAEAR
ALNALRESVALARAVLVERRERRVRHEASGLPSLAEGDVAELCERLRTDVEVRRRAEALL
RAKLDTDDAARARHGAEARALEQRRADAEVWKTLGDLIGSHDGKKFKVFAQSLTLDALLL
HANAHLRELARRYRLERVPGHDLDLQVVDGDMGDEVRSVASLSGGESFLVSLALALGLAS
LSSETTQVETLFIDEGFGTLDPETLEVALATLDALQATGRQVGIISHVSGLAERIGVQVR
VVKQGGGRSRLVVEGDAGIVVPSDQQVA
NT seq 3867 nt   +upstreamnt  +downstreamnt
gtgaagattctcgcgattcgcggcagcaacctcacgagcttcgcgggggacttcgcgctg
gagctggaccaggcgccgctggaccggctggggctgttcgccatctccggcgcgacgggg
gcggggaagagcacgctgctggatgcgctgtgcctggcgctgttcgaccgcacgccccgg
ctgggcgggcccagcaaggtgctggtgggccgggcggacgaggacgaggaggcgcggctg
tccgcgtacgacgtgcgcggcatgctgcggcgcggggcgggcaagggccacgcggaggtg
gacttcctgggcaaggacgggcggcggtaccgggcccggtggaacgtgtggcgtgcccgc
gagcgcgcggaggggcgattccggccgcaggagctgagcctgacggacgtggcctcgggg
cagctgttcggccgcaccaagggcgaggtgctccacgcgattcaagagcggctggggctg
tcgttcgatcagttccggcgctcggcgctgctggcgcagggggagttcgcggcgttcctg
cgcgcggacgcgaacgagcgcgcggagctgctggagcggatgacgggcacggaggtgtac
agccggctgtccatcgccgcgcacgagaagaacgcgaaggagcaggaggagctgaagcgg
ctgtcgctggggctcgcggccatcgcgctgatgtcggacgcggatcgcgagagcgtgcgc
gcccaactgggcgaggaggaggctgctcgggtccgtgaggagacgcggtcgcgagaggcg
gaggcggcccggtcctggtacgcgcagcgcgcggagttcgtggggcaggagcagcaggcc
gaaagcgcggtagcccgggcggagtcggagcgggaggcggcggcgcctcgtgaggcgctg
ctggagtcggtgcgcgcggcggagggcttccgcgcggtggtgtccgcggtggaggccgcg
gagcagggctgcgtgagggcggaggccgagcagttggagcgggcctcgcaggcggaagcg
gcgctcgcggcggcggcggcgcagcggcaggtgcggatgcaggcggaggccgcgcgggcg
gcggcgctggaggcggaggcgtcggtgcgtccggcgctggaggaggccgcgaccctggac
acgcgccgcgcggaggcggagcgcgaggcccgtgaggccgcggagctggcgaagcaggcg
aaggccgcggaagcgtcggctcgcgatgcgctggggctggtgcaggcggcggaagcgaag
gcccaggtgctggtggacgcggccgaggcatggcgcacgtcgcacgcgagctgggagtcc
ctggccacggagtggccccgctggcagcgcgagctggagcgcttcgcgggggcgctgaag
gaggaacaggcggcgggcgcggacgtggatcggttggggacggacgcggaccgcctgggc
aacgaggcccaggcgcgccgagaggagcaccagggcgcggtcgagtcggaagcgcaggcg
caggccctggcgacgcacgcggaagccgcgctgggcgaggatggcggcgcggcacggcga
gcgctccgggaagcgctgctggcgcgacaggaggtcctgggggcgctgacgctcgcgggt
gagggcgctcgggcggagggctcggcggaaggtgacgcggcggcggaggtgaagacgcac
cgcgaggtttcccagcgcgcggcggcggaggcgaaggacgcggcggcggcgcgggcgacg
caggaggcgatgctccacgaggcgcgccgtgcgcagtcgcgagcggaggcgacgcagggg
ctggcctcgcaccgggccgcgctgcatgaaggtgagccgtgcccgctgtgcggcgcgctc
gagcatccgtatgcccgggaggcctccgcgctggaagggctggtcgcggaggccgcggcc
cgggtgctggagctggagtcggcgcgcgatgccgcggcgaagcaggagagcgcggcgagc
gtgcggcaggcgaccgcggacaccgccgcgacccaggccgaagcccggcgtgacacggcg
gcccgcaagcgcacggcgcaccgtgatgcctggcgcgcggcgcgcgagcggtggacccgc
gcggcgcttccgggggaggacacggcaacactggcggacgcgaaggcatcgtcacgcgga
tcgaaggagcacgccgcgcaggatgccagcgccgctgcatcgcctcccgaggacgcggag
gccaccaccgcccaggcgtggatccgcgccgcgcaggaagacgtgcgcgcgcggctcgcg
acccttcgtgacgaagaggcctccgcggaggcccgcgccagcgccgctcgcgaggcccgg
gccctgctggagacccggcgcacccggcgcgaaggcgcggccgaggcccttcgcaaggcc
gaggacgcctggtcccgcgcggcccagtcccaccgggatgcgctccttcgccgggacacc
gcccgcgaggcccgcgagcgcgccctcacggaagtgtcccctccgttcgccagcgaggag
gtcacctggaaggacaagctcgccgcggactccgctcgcttccagagccggtgcctggag
cgcgtgacgaagtggcgcgagaagctcgcggagctggagacctctcgcaagcgcctggag
gagcaacagggcctgcgtgcccgtgaagaggtccgcctgcagtcccggcacgaggacgcg
gagaccgccgcccaccgcgcgagcctcaaggacgcggccttccaggatgcgtccagggcc
cgcgcccggctgctccagggccgccccacgcaggaggtgcgcgcggaggtccaggcgcgc
atcgacgccgcccagtccacctacgagcgcgcccgcgaggactccgaagccctccagcag
gcggagaaggtggccaccgcccgcgccgaggacgccgtgcgcctgcgcaccgaggccgcc
ctcgcgctcgagcgcgcccaggccgtcctctcggagcgcctcgcgggccatggctccacc
ctggagcaactcaaggccctgctgtcgcgcggcgccgcctggtgcgacgcggaggcccgc
gcgctcaacgccctgcgcgagtccgtggccctggcccgcgccgtcctcgtggagcgccgc
gagcgccgcgtccgccacgaggcctccgggcttccctcgctcgcggaaggggacgtcgcg
gagctctgcgagcgcctgcgcaccgacgtggaggtgcgccgccgcgccgaggccctgctg
cgcgcgaagctggacaccgacgacgccgcccgcgcccgccatggcgcggaggcccgggcc
ctggagcagcgccgcgccgacgcggaggtgtggaagacgctgggcgacctcatcggttcg
cacgacggaaagaagttcaaggtcttcgcccagagcctcaccctggacgcgctgctcttg
cacgccaacgcgcacctgcgcgagctggcccgccgctaccgcctggagcgcgtgcccggc
cacgacctggacctccaggtggtggacggcgacatgggcgacgaggtccgcagcgtggcc
agcctctccggcggcgagagcttcctcgtgtcgctcgcgctcgcgctgggcctggcctcg
ctgtcgtcggagacgacgcaggtggagaccctcttcatcgacgagggcttcggcacgctg
gacccggagacgctggaggtcgcgctcgccacgctcgacgcgctccaggccaccggccgc
caggtgggcatcatctcccacgtgagcgggctcgccgagcgcatcggcgtgcaggtgcgc
gtggtgaagcagggcggcggccgcagcaggctcgtcgtcgaaggcgacgcggggatcgtc
gtgccctcggatcaacaggtggcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (44)   

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