KEGG   Corallococcus coralloides: COCOR_01564
Entry
COCOR_01564       CDS       T01780                                 
Symbol
yfjP
Name
(GenBank) putative DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
ccx  Corallococcus coralloides
Pathway
ccx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    COCOR_01564 (yfjP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccx03400]
    COCOR_01564 (yfjP)
Enzymes [BR:ccx01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     COCOR_01564 (yfjP)
DNA repair and recombination proteins [BR:ccx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     COCOR_01564 (yfjP)
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-ProteinID: AFE10938
UniProt: H8MWY7
Position
1882669..1883364
AA seq 231 aa
MRPMPRAPVSTPVLLPDAFTPAARRALVRADPILGTLFKTIGPFRFERSPLHSPFEALAH
SIVYQQLHGRAAATIFGRVCERVGQGKGFTPQKLLALPDATLREAGLSANKLLAIQDLAR
KTVDGTVPPLARVRRMSDADLIEHLTQVRGIGQWTVEMLLIFRLGRPDILPVDDYGVRKG
FMVLHGLKEQPKPKALLAYGERWRPYRSVVSWYLWRAADKPVGTFAPPEGS
NT seq 696 nt   +upstreamnt  +downstreamnt
atgcggcccatgccgcgcgctcctgtttccacccctgtgttgctgccggatgccttcaca
cccgccgcgcgccgcgccctcgtgcgcgcggatcccatcctgggcacgctcttcaagacg
attggcccgttccgcttcgagcggagcccgctgcacagccccttcgaggcgctggcgcac
tccatcgtctaccagcagctccacggccgcgcggcggcgaccatcttcggccgcgtctgc
gagcgggtggggcagggcaagggcttcacgccccagaagctgctcgcgctcccggacgcc
acgctgcgcgaggccgggctgtccgcgaacaagctcctggccatccaggacctggcgcgc
aagacggtggacggcacggtgccgccgctcgcgcgcgtgcgccgcatgtccgacgcggac
ctcatcgagcacctcacgcaggtgcgcggcattggccagtggaccgtggagatgctgctc
atcttccgcctgggccggccggacatcctccccgtggatgactacggcgtgcgcaagggc
ttcatggtcctgcatggcctgaaggagcagcccaagcccaaggcgctcctggcgtacggc
gagcgctggcggccctatcgcagcgtggtgagctggtacctgtggcgggcggcggacaag
cccgtgggcaccttcgccccgccggagggcagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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