KEGG   Corallococcus coralloides: COCOR_02484
Entry
COCOR_02484       CDS       T01780                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ccx  Corallococcus coralloides
Pathway
ccx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    COCOR_02484 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccx03400]
    COCOR_02484 (ruvB)
Enzymes [BR:ccx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     COCOR_02484 (ruvB)
DNA repair and recombination proteins [BR:ccx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     COCOR_02484 (ruvB)
    RecFOR pathway proteins
     COCOR_02484 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 Mg_chelatase TIP49 bpMoxR AAA_3 AAA_18 nSTAND3 AAA_14 RNA_helicase TsaE AAA_PrkA Torsin
Other DBs
NCBI-ProteinID: AFE10294
UniProt: H8MQT4
Position
2998500..2999537
AA seq 345 aa
MAMARKSDDTLSGDVQPEDIRLEASLRPRTFDEYVGQGTVVEKLKVYVAAARSRGDALDH
CLFSGPPGLGKTSLAHIIANELGVGIHVTSGPALEKKGDLAGLLTNLNERDILFIDEIHR
LNAAVEEYLYPAMEDFRLDITIDTGPAARAMKIDLPPFTLVGATTRTGLLTSPLRDRFQI
QDRLEYYEPKFLEQILDRSARILGVPMDRAASREVSTRSRGTPRIANRLLRRLRDFAQVE
GNGRITYDLAHDSLSRLGVDASGLDAMDRKILLTILEKFGGGPVGVETIAASVGEQRDTI
EDVYEPFLMQEGFLMRTPRGRTATLRTYQYFKKTPPPSSPQGALF
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgatggcgaggaagtccgacgacaccctctcgggagatgttcagccggaagacatc
cggctggaggcctccctgcgcccgcgcaccttcgacgagtacgtggggcaggggacggtc
gtcgaaaagctcaaggtgtacgtggccgcggccaggagccggggtgacgcgctggaccac
tgtctgttctccggccctccgggcctgggcaagacgtcgctcgcgcacatcatcgcgaac
gagctgggtgtgggcatccacgtcaccagcggccccgcgctggagaagaagggcgacctg
gcgggcctgctcaccaacctcaacgagcgggacatcctcttcatcgacgagatccaccgc
ctcaacgccgccgtggaggagtacctctacccggcgatggaggacttccggctggacatc
accatcgacaccgggcccgccgcccgcgcgatgaagattgatctgccgcccttcacgctg
gtgggcgccaccacgcgcacgggcctgctcacgtcccccctgcgcgaccgcttccagatt
caagatcgcttggagtactacgagccgaagttcctggagcagatattggaccgctccgcg
cgcatcctcggcgtgcccatggaccgcgccgccagccgcgaggtctccacccgctcgcgc
ggcacgcctcgcatcgcgaaccgcctgctgcgccgcctgcgcgacttcgcccaggtggag
ggcaacggccgcatcacctacgacctggcgcacgactcgctgagccgcctgggcgtggac
gccagcggcctggacgcgatggaccgcaagattctcctcaccatcctggagaagttcggc
ggcggcccggtgggcgtggagaccatcgccgcgagcgtgggcgaacagcgcgacaccatc
gaggacgtctacgagcccttcctcatgcaggagggcttcctcatgcgcacgccccggggc
cgcaccgccacgctgcgcacctaccagtacttcaagaagacgccgccccccagctccccg
caaggggcgctcttctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (32)   

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