KEGG   Corallococcus coralloides: COCOR_02728
Entry
COCOR_02728       CDS       T01780                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ccx  Corallococcus coralloides
Pathway
ccx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    COCOR_02728 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccx03400]
    COCOR_02728 (nth)
Enzymes [BR:ccx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     COCOR_02728 (nth)
DNA repair and recombination proteins [BR:ccx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     COCOR_02728 (nth)
 Prokaryotic type
     COCOR_02728 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S DUF2400 HP1451_C
Other DBs
NCBI-ProteinID: AFE09644
UniProt: H8MVG3
Position
complement(3379319..3379954)
AA seq 211 aa
MKPAALVPVVLERLREKYPDAKYELNWNTPFQLLVATILAAQCTDERVNRVTAELWKKYD
GPQALADADTAELEEDLKPTGFFKQKTKTVQAVSRALLDAHGGEVPDRMEDLVELPGVAR
KTANVVLNTAFNQASGVIVDTHVARVSQRLGLTKQEKPEAIETDLMKLVPKDDWTFFGPA
VVLHGRYTCVAKKPKCAECLFNDVCPKLGVA
NT seq 636 nt   +upstreamnt  +downstreamnt
atgaaacccgccgccctcgtccccgtggtgctcgaacgccttcgcgagaagtaccccgac
gcgaaatacgagctgaactggaacacgcccttccaattgctggtggccaccatcctggcc
gcgcagtgcacggacgagcgcgtcaaccgcgtcaccgccgagctgtggaagaagtacgac
ggtccccaggcgctcgcggacgcggacaccgcggagctggaggaggacctcaagcccacc
ggcttcttcaagcagaagaccaagacggtgcaggccgtgagccgcgcgctgctggacgcc
cacgggggcgaggtgcccgaccgcatggaggacctggtggagctgcccggcgtggcgcgc
aagacggccaacgtcgtgctcaacaccgccttcaatcaggcctccggcgtcatcgtggac
acgcatgtggcccgcgtcagccagcgcctgggcctgacgaagcaggagaagccagaggcc
atcgagacggacctgatgaagctggtgcccaaggacgactggaccttctttggccccgcc
gtggtgctgcacggccgctacacctgcgtggccaagaagcccaagtgcgcggaatgcctc
ttcaacgacgtgtgccccaagctgggcgtggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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