KEGG   Corallococcus coralloides: COCOR_04196
Entry
COCOR_04196       CDS       T01780                                 
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ccx  Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccx03009]
    COCOR_04196 (rumA)
Enzymes [BR:ccx01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     COCOR_04196 (rumA)
Ribosome biogenesis [BR:ccx03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    COCOR_04196 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 TRAM Methyltransf_11 Ubie_methyltran Methyltransf_4 RrnaAD Cons_hypoth95 Methyltransf_15 Met_10 PCMT MTS
Other DBs
NCBI-ProteinID: AFE10287
UniProt: H8MYX0
Position
5221778..5223073
AA seq 431 aa
MTTLPESPIELTIERLGQLGEGVAQWEGRTVFVPGAFPGDTVRVRLEAQGKVLRGLLGQV
LTDGAERVPSRCVYSDACGGCDWLELSVPAQRSAKQEIVLSTLEHLGHLKRSDFTVRPLM
VAPRDWGYRRRAVLHGAGKGALGYFGRRTHERIPVDVCPALTPVLTALPGKLAPLLKPLA
KDTEEVLLLAEGDKAAFAVNMSGPVTARHLEAAEAAVRALRLEGAVLVPKEGSARLIGRP
VLRSLSPLRPEVPVYLRPDAFAQAHAEANVGLVTAALYELGAKETDSVLELYSGNGNFTF
PLAGTAGSVLGVESSPVGVELAQRSAREGGVANVRFVQGDARKVCDGLVAEGRSFDLCLA
DPPRAGAPGLAKWMRALNVRRVVYVACDPASLARDAAGLVEAGYKPVALQVVDMFPQTHH
VEAVMSFERGA
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgacgacgctgcccgaatcccccattgaactgacgattgaacggctgggccagctgggc
gaaggcgtggcccaatgggagggccgcaccgtcttcgtgccgggcgccttccccggcgac
accgtgcgcgtgcgcctggaggcccagggcaaggtcctgcgcggcctgttgggccaggtg
ctgacggatggggcggagcgcgtgccgtcgcgctgcgtgtactccgacgcgtgcggcggc
tgtgactggctggagctgtccgtcccggcccagcggtccgcgaagcaggagatcgtcctc
tccacgctggagcacctgggccacctgaagcgctcggacttcaccgtgcggccgttgatg
gtggcgccccgggactggggctaccgccgccgcgcggtgctgcacggggcggggaagggg
gcgctcggctacttcggccggcgcacgcacgagcgcatccccgtggacgtctgccccgcg
ctgacgccggtgctcactgcgctgcccgggaagctggccccgctgctcaagccgctggcc
aaggacaccgaggaggtgctgctgctggccgagggtgacaaggccgcgttcgcggtgaac
atgagcggcccggtgacggcgcggcacctggaggctgcggaggccgcggtgcgcgcgctg
cggctggagggcgcggtgctggtgcccaaggagggctctgcgcggctcatcggccggccg
gtgctgcgctcgctgtccccgctgcgcccggaagtgccggtgtacctgcggccggatgcg
ttcgcgcaggcgcacgcggaggccaacgtggggctcgtcacggcggccctgtacgaactg
ggcgcgaaggagacggactccgtgctggagctgtactccggcaatggcaacttcacgttc
cccctggcgggcacggccgggtcggtgctgggcgtggagtcgtccccggtgggcgtggag
ttggcgcagcggagtgctcgcgagggtggggtggccaacgtgcgcttcgtccagggcgac
gctcgcaaggtgtgcgacgggctggtggcggaggggcgttcgttcgacctgtgcctcgcg
gatccgccgcgcgccggggcgccgggcctggcgaagtggatgcgcgcgctgaacgtgcgc
cgggtcgtctacgtggcgtgcgacccggcctcgctggcgcgcgacgcggcggggctggtg
gaggccggttacaagcccgtggcgctccaggtggtggacatgttcccgcagacgcaccac
gtggaagcggtgatgtccttcgaacggggagcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (30)   

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