KEGG T01780: COCOR

Corallococcus coralloides: COCOR_05575

Entry

COCOR_05575       CDS       T01780

Symbol

gspD

Name

(GenBank) general secretion pathway protein D

K02453

general secretion pathway protein D

Organism

ccx Corallococcus coralloides

Pathway

ccx03070

Bacterial secretion system

Brite

KEGG Orthology (KO) [BR:ccx00001]
09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    COCOR_05575 (gspD)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ccx02044]
    COCOR_05575 (gspD)
Secretion system [BR:ccx02044]
Type II secretion system
  General secretion pathway protein
   COCOR_05575 (gspD)

SSDB

Motif

Pfam:

Secretin Secretin_N type_II_gspD_N0

Other DBs

NCBI-ProteinID:

AFE08988

UniProt:

H8N0S0

Position

7007314..7009920

AA seq 868 aa
MKTTLPSWMLCLCLALSVPAWAQRRPTQPGTPAPAREAQGERDRTITPQNGSAAPAENQG
PRQTPTCEQARRNARYGIYFDKVDIEKLVQTVSDATCRTFILPENVRGKISIIGPENGRV
EVDADSFYSAFLAALDANGLAVYPYGRFLKIVDKRSAKQNPIPTIVDEDTPYTTNEQMVT
KLFKIKYVEVEPLRGVLQQLVSKDGDTIPYPPDTIIVNDVGSNIHRLERLINQLDSRSSS
DEMRIIQVQYATAQDVANTIQKLFEAKAGAGGRPGQRPGNFTQGTPGQPPPGSEGVVGGT
ETGGAVTLSQIIPDERTNKLIVVASPAAFGRIQDLVREIDIPSGSGNKINVYPLENANSE
ELASTLQSLAQGTANRPQRGPIPAQPQGLPRAPAQAAELFSGEVKISADKGTNSLVIVAS
QGDYKNIVQIIQQLDQPRRQVFVEAVIMEVNLDRNSEFGINFHQGFSLKTDDGAIPGILG
TNYSGGSIPPSFSLANLASMGGFLAGIQGPVLPELKNLGIDIPAFGVVLNAMQQSSDVNV
LSTPHLLTSDNEEAEITVGQNVPFQSGFTPSALGASLGGAGAGAGAVNPSLLGSLGGLGS
LYAPITRQNVELKLTVKPQINESDYIRLVITEQTEEIASTDPVLGPTTSKRSAKTTVIAK
DMETVVIGGIMQDRTLESVSKVPVLGDIPLLGHLFRDTTRRKTKTNLLLFLTPYIIRGQE
DFRRIFERKMKERQQFVEQFYGQVPGYDVAVDFSRKPGPLSRMNQSVIKEEQRVENGGSG
TPNERVIRPNGSPAPGGAPSPSPARPGGEAPAPQEGAAPSPEGDQAPRNFEAPPEGSERS
VPAPQPEVIAPSPDADAERLRIQPGDGE

NT seq 2607 nt +upstreamnt +downstreamnt
atgaagacgacgctcccgtcctggatgctctgcctgtgcctcgcgctctccgttcccgcg
tgggcccagcgccgtcctacacagcccggtaccccggcccccgctcgcgaggcccagggt
gaacgtgaccggaccatcaccccgcagaacggcagcgccgcgcccgccgagaaccagggc
ccccgccagacgcccacgtgcgagcaggcccggcgcaacgcgcgctacggcatctacttc
gacaaggtggacatcgagaagctcgtccagaccgtgtcggacgccacgtgccgcacgttc
atccttccggagaacgtgcgcgggaagatctccatcatcggtccggagaacggccgcgtg
gaggtggacgcggactcgttctactccgcgttcctcgccgcgctcgacgcgaacgggctg
gccgtctacccgtacggccgcttcctgaagatcgtcgacaagcgctcggcgaagcagaac
cccatcccgaccatcgtggacgaggacaccccgtacacgacgaacgagcagatggtcacc
aagctgttcaagatcaagtacgtggaggtggagccgctgcgcggcgtcctccagcagctc
gtgtccaaggacggcgacaccatcccgtacccgccggacaccatcatcgtcaacgacgtg
ggctccaacatccaccgcctggagcgcctcatcaaccagctggacagccgctcctccagc
gacgagatgcgcatcatccaggtgcagtacgccaccgcgcaggacgtggccaacaccatc
cagaagctctttgaagccaaggccggcgcgggcggccgcccgggccagcgccccggcaac
ttcacgcagggcacgccgggccagcctcctccgggctccgagggcgtggtcggcggcacg
gagacgggcggcgccgtcaccctgtcgcagatcatcccggacgagcgcaccaacaagctc
atcgtcgtggccagccccgccgccttcggccgcatccaggacctggtgcgggagatcgac
atcccgtccggcagcggcaacaagatcaacgtctacccgctggagaacgccaactcggag
gagctggccagcacgctccagtcgctggcgcagggcaccgccaaccgcccccagcgcggc
cccatcccggcccagccgcagggcctgccgcgcgcgcccgcccaggccgcggagctgttc
agcggcgaggtgaagatctcggcggacaagggcaccaactcgctggtcatcgtcgccagc
cagggcgactacaagaacatcgtccagatcatccagcagctggatcagccgcgccgccag
gtgttcgtggaggcggtgatcatggaagtgaacctggaccgcaacagcgagttcggcatc
aacttccaccagggcttcagcctcaagacggatgacggcgccatccccggcatcctgggc
accaactactccggcggctccatcccgccgtccttctcgctggcgaacctggccagcatg
ggcggcttcctcgccggcatccagggccccgtcctgccggagctcaagaacctgggcatc
gacatcccggccttcggcgtggtgctcaacgccatgcagcagtcgtccgacgtgaacgtg
ctgtccacgccgcacctgctcaccagcgacaacgaggaggccgaaatcacggtgggccag
aacgtgcccttccagtccggcttcaccccgtccgcgctgggcgcgtcgctcggcggcgcg
ggcgcgggcgcgggcgccgtcaatccgtcgctgctgggctcgctgggcggcctggggtcg
ctgtacgcgcccatcacccgccagaacgtggagctcaagctcaccgtcaagccgcagatc
aacgagagcgactacatccgcctggtcatcaccgagcagacggaggagatcgcctccacg
gaccccgtcctgggtcccaccacgtccaagcgcagcgcgaagacgacggtcatcgccaag
gacatggagacggtggtgattggcggcatcatgcaggaccgcacgctggagtccgtctcc
aaggtgccggtgctgggtgacatcccgctcttgggccacctgttccgcgacaccacgcgc
cgcaagacgaagacgaacctgctgctcttcctcacgccctacatcatccgcggccaggag
gacttccgtcgcatcttcgagcgcaagatgaaggagcggcagcagttcgtggagcagttc
tacggccaggtccccggctacgacgtcgcggtggacttcagccgcaagcccggccccctg
tcgcgcatgaaccagtccgtcatcaaggaagagcagcgggtggagaacggcggcagtggc
acgcccaacgagcgcgtcatccgcccgaacggctctccggcccctggcggcgccccctcc
ccgtcccccgcgcggccgggcggggaagcgcctgctccgcaggaaggtgccgcgccctcc
cccgagggcgaccaggcaccgcgaaatttcgaggcgcctccggagggttcggagagatca
gtccccgcgccacagcccgaggtgatcgcgcccagcccggacgcggacgccgagcggctg
cgcatccagccgggagacggggagtaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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