KEGG   Corallococcus coralloides: COCOR_06250
Entry
COCOR_06250       CDS       T01780                                 
Symbol
cefD
Name
(GenBank) isopenicillin N epimerase
  KO
K04127  isopenicillin-N epimerase [EC:5.1.1.17]
Organism
ccx  Corallococcus coralloides
Pathway
ccx00311  Penicillin and cephalosporin biosynthesis
ccx01100  Metabolic pathways
ccx01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09100 Metabolism
  09110 Biosynthesis of other secondary metabolites
   00311 Penicillin and cephalosporin biosynthesis
    COCOR_06250 (cefD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01008 Polyketide biosynthesis proteins [BR:ccx01008]
    COCOR_06250 (cefD)
Enzymes [BR:ccx01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.17  isopenicillin-N epimerase
     COCOR_06250 (cefD)
Polyketide biosynthesis proteins [BR:ccx01008]
 Nonribosomal peptide tailoring proteins
  Others
   COCOR_06250 (cefD)
SSDB
Motif
Pfam: Aminotran_5 Cys_Met_Meta_PP DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AFE08293
UniProt: H8MNW9
Position
7857887..7859083
AA seq 398 aa
MSAPLPAHKTHWGLDPQVVFLNHGSFGACPKPVLQHQSELRARLEAEPVRFLARELEPLL
NEARAALGAFVGADPDDLAFVPNATTGVNTVLRNLRFQPGDELLTTDNEYNASKNALDVA
AAEKGVKVVVAKLPWPVTSPESVVDAVMAQVTPRTRLLLVDHITSQTALVMPLAELVRRL
REKGVETLVDGAHGPGMVPLALQELGAAYYTGNCHKWLCAPKGAAFLYVRRDLQPDFKPM
VVSHGHNSPRTDRSRFRLEFDWVGTVDPTPFLCIPTVIRFMAGLVPGGWPEVMESNREKV
LAARRRLDAKLGNAAPLCPESMVGSMACVALPDGFPEHPEPPLYVDPLHVRLFEEHHIEI
PVTAWPRAPKRHLRLSAQLYNTAADYEALVRALEALLR
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgagcgctcccctccccgcccacaagacccactgggggctggacccccaggtcgtcttc
ctcaaccacggctcgttcggcgcctgccccaagccggtgctccagcaccagtcggagctg
cgggcccggctggaagcggagcccgtgcgcttcctcgctcgcgagctggagcctctgctg
aacgaggcgcgcgccgcgctcggggcgttcgtgggcgcggatccggacgacctggcgttc
gtgcccaacgccaccacgggcgtgaacaccgtgctgcgcaacctgcgcttccagcccggc
gacgagctgctcaccaccgacaacgaatacaacgcgtccaagaacgcgctggacgtggcc
gccgccgagaagggcgtgaaggtggtggtggcgaagctgccctggcccgtgacgtcgccg
gagtcggtggtggacgcggtgatggcgcaggtgacgccacgcacgcgactgctcctcgtg
gatcacatcaccagccagacggcgctggtgatgccgctggcggagctggtgcgcaggctg
cgtgagaagggcgtggagacgctggtggacggcgcgcacggtccgggcatggtgccgctg
gcgctccaggagctgggcgcggcgtactacacgggcaactgccacaagtggctgtgcgcg
cccaagggcgccgcgttcctgtacgtgcgccgcgacctgcagccggacttcaagcccatg
gtggtgagccacgggcacaactcgccgcgcacggaccgctcgcgcttccggctggagttc
gactgggtgggcacggtggaccccacgcccttcctgtgcatccccacggtgatccgcttc
atggcgggactcgttccgggcgggtggccggaggtgatggagtccaaccgggagaaggtg
ctggccgcccggcggagactggacgcgaagctgggcaacgcggcgccgctgtgcccggag
tccatggtgggcagcatggcgtgcgtggccctgccggacggcttcccggagcacccggag
ccgccgctctacgtggaccccctccatgtgcgcctgttcgaggagcaccacatcgagatc
cccgtcaccgcctggccccgggcgcccaagcggcacctgcgactgtccgcgcagctctac
aacaccgccgcggactacgaggcgctggtgcgtgctttggaagcgctgctgcgttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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