KEGG   Corallococcus coralloides: COCOR_07804
Entry
COCOR_07804       CDS       T01780                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
ccx  Corallococcus coralloides
Pathway
ccx03030  DNA replication
ccx03430  Mismatch repair
ccx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCOR_07804 (dnaN)
   03430 Mismatch repair
    COCOR_07804 (dnaN)
   03440 Homologous recombination
    COCOR_07804 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccx03032]
    COCOR_07804 (dnaN)
   03400 DNA repair and recombination proteins [BR:ccx03400]
    COCOR_07804 (dnaN)
Enzymes [BR:ccx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     COCOR_07804 (dnaN)
DNA replication proteins [BR:ccx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     COCOR_07804 (dnaN)
DNA repair and recombination proteins [BR:ccx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     COCOR_07804 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_3 DNA_pol3_beta DNA_pol3_beta_2
Other DBs
NCBI-ProteinID: AFE08622
UniProt: H8MUS9
Position
complement(9739443..9740549)
AA seq 368 aa
MEFRIAADELKKALYRAQGIVERKTTMPILANVLLTANKGSITVTAFDLDIGIVSEHPAD
VSKPGAVTLSAKYVFDIVQNLPDAEVTLKKLANNYVDISSGSAHFKIVGMAAEEYPKLPK
EENAPLVQISGNVLLEMIKKTQFAISSDETRYILNGVFFEPQQSGKVRMVATDGHRLSLI
EREMSGDFKLKSGVIIPRKGLMELKRLLDEAPDAECHLGFAENSALFKKPGLTMVMRLID
GQFPEYQRVIPKEGEKVVLVPKVRLLEGLKRIALLSADKSNAIRIGLEKGKLLITASNPD
LGEARDALDVDYQGNDITIGFNARYLMDVLGVTETDEVSFELGDEHSPGVLHGPGDRSFT
AVVMPMRV
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggaattccgcatcgccgccgacgagctgaagaaggccctctaccgcgcccagggcatc
gtggagcgcaagacgacgatgcccatcctcgccaacgtgctgctcacggcgaacaagggc
agcatcacggtcacggccttcgacctggacatcggcatcgtgtccgagcacccggcggac
gtgtccaagccgggcgccgtcacgctgagcgcgaagtacgtcttcgacatcgtccagaac
ctcccggacgcggaggtcacgctcaagaagctggcgaacaactacgtcgacatctcctcc
ggctccgcgcacttcaagatcgtcggcatggccgccgaggagtacccgaagctgcccaag
gaggagaacgctcccctggtgcagatctccggcaacgtgctgctggagatgatcaagaag
acccagttcgccatctccagcgacgagacgcgctacatcctcaacggcgtcttcttcgag
ccgcagcagagcggcaaggtccgcatggtggccacggacggccaccggctgtcgctcatc
gagcgcgagatgtccggcgacttcaagctcaagagcggcgtcatcatcccgcgcaagggc
ctgatggagctcaagcgcctgttggacgaggccccggacgcggagtgccacctggggttc
gcggagaactcggcgctgttcaagaagccgggcctcaccatggtgatgcgcctcatcgac
gggcagttcccggagtaccagcgcgtcatccccaaggagggcgagaaggtcgtcctcgtg
cccaaggtgcgcctgctggaaggcctcaagcgcatcgcgctcttgtccgcggacaagagc
aacgccatccgcatcggcctggagaagggcaagctgctcatcaccgccagcaacccggac
ctgggtgaggcgcgtgacgccctggacgtggactaccagggcaacgacatcaccatcggc
ttcaacgcccgctacctcatggacgtcctgggcgtgacggagacggacgaggtcagcttc
gagctgggcgacgagcacagcccgggcgtgctgcacggccccggcgaccgcagcttcacc
gccgtggtcatgcccatgcgcgtctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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